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SRR1747065_scaffold_0_prodigal-single.1__X__X__00004
Bact-VirSRR1747065_scaffold_0_prodigal-single.1__X__X__00004
Identity
- Kingdom:
- phage
Quality
68.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-40
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gn4B01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.61 | 50.0 | 3.03e-01 | 93.9% | 57.4% |
| 2r46A04 | 6.10.250.1890 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.61 | 51.0 | 5.07e-01 | 97.0% | 100.0% |
| 4v19K02 | 1.10.10.250 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ribosomal protein L11/L12, C-terminal domain | 0.58 | 49.0 | 3.85e-01 | 100.0% | 81.3% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4153664 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.71 | 53.0 | 3.80e-01 | 100.0% | 28.0% |
| 3968018 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.67 | 49.0 | 3.94e-01 | 100.0% | 37.3% |
| 4231800 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 52.0 | 3.85e-01 | 100.0% | 50.5% |
| 4989969 | 602.1.1.1 ↗ | alpha arrays › L-aspartase middle domain-like › L-aspartase middle domain-like › L-aspartase middle domain-like › Lyase_1 | 0.58 | 45.0 | 2.74e-01 | 100.0% | 37.8% |
| 3471822 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.57 | 48.0 | 3.63e-01 | 100.0% | 36.7% |