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SRR1747065_scaffold_0_prodigal-single.1__X__X__00019
Bact-VirSRR1747065_scaffold_0_prodigal-single.1__X__X__00019
Identity
- Kingdom:
- phage
Quality
88.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 17-153
Domain cluster:
rep: SRR1747065_scaffold_0_prodigal-single.1__X__X__00333__D26-122
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1dn1B00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 45.0 | 3.84e-01 | 87.6% | 96.4% |
| 1v9mA03 | 1.20.1690.10 | Mainly Alpha › Up-down Bundle › V-type ATP synthase subunit C fold › V-type ATP synthase subunit C domain | 0.53 | 32.0 | 3.74e-01 | 83.9% | 85.4% |
| 5xjnA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.51 | 40.0 | 2.88e-01 | 83.2% | 80.1% |
| 1c0gA03 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.50 | 27.0 | 3.15e-01 | 82.5% | 72.8% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3626320 | 3919.1.1.2 ↗ | alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › COMM_HN | 0.61 | 37.0 | 4.06e-01 | 81.0% | 73.6% |
| 3782945 | 101.1.1.81 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Cdh1_DBD_1 | 0.59 | 45.0 | 4.82e-01 | 80.3% | 92.5% |
| 3550609 | 3919.1.1.2 ↗ | alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › COMM_HN | 0.58 | 35.0 | 3.81e-01 | 81.0% | 71.3% |
| 4983915 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 36.0 | 3.87e-01 | 74.5% | 75.7% |
| 4030405 | 603.6.1.0 ↗ | alpha bundles › STAT-like › MukF C-terminal domain-like › MukF C-terminal domain-like | 0.51 | 44.0 | 3.80e-01 | 91.2% | 98.6% |
| 4011663 | 4964.1.1.2 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › RNA_pol | 0.50 | 38.0 | 3.22e-01 | 80.3% | 87.5% |