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SRR1747065_scaffold_0_prodigal-single.1__X__X__00061

Bact-Vir

SRR1747065_scaffold_0_prodigal-single.1__X__X__00061

Identity

Kingdom:
phage

Quality

73.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 22-160
PDB
Domain cluster: rep: qs_7_scaffold_0_curated_closed_complete_prodigal-single.1__X__X__00207__D32-129
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1kwiA00 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 33.0 4.06e-01 74.8% 96.5%
3lyxB00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.53 39.0 4.20e-01 84.2% 90.0%
2k5vA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 22.0 2.64e-01 77.0% 53.1%
3mqqB00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.52 39.0 4.12e-01 84.9% 91.5%
5iu1B00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.51 37.0 4.05e-01 87.8% 94.6%
7a6pB01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.51 39.0 3.97e-01 85.6% 81.9%
3icyA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.51 36.0 3.87e-01 73.4% 95.8%
3fg8A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.50 34.0 3.87e-01 84.2% 91.5%
ECOD (18)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3657425 3887.2.1.0 ↗ a+b two layers › Yeast killer toxin-like › Antifungal protein ginkbilobin-2 › Antifungal protein ginkbilobin-2 0.56 35.0 4.23e-01 86.3% 100.0%
4949875 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.53 39.0 4.06e-01 85.6% 83.8%
5004654 223.1.1.13 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.52 39.0 4.13e-01 84.9% 90.0%
5061581 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.52 38.0 4.22e-01 84.2% 96.4%
138820 223.1.1.13 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.52 39.0 4.14e-01 84.2% 92.4%
5059589 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.52 39.0 4.23e-01 90.6% 99.1%
5003155 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.52 37.0 3.42e-01 84.9% 56.2%
4979994 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.51 39.0 3.94e-01 84.9% 81.5%
3967408 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.51 38.0 3.97e-01 84.9% 83.8%
4395757 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.51 39.0 4.02e-01 84.9% 86.2%
5002718 223.1.1.13 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.51 40.0 4.03e-01 84.9% 81.4%
4959019 223.1.1.13 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.51 38.0 3.79e-01 82.0% 75.2%
4996826 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.51 39.0 2.65e-01 84.9% 20.7%
5082807 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.50 39.0 4.19e-01 87.8% 100.0%
2440125 223.1.1.14 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.50 38.0 4.03e-01 84.2% 90.2%
3926942 223.1.1.29 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_11 0.50 37.0 3.93e-01 84.2% 92.2%
4999864 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.50 38.0 3.98e-01 84.9% 86.9%
5049662 223.1.1.13 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.50 38.0 4.06e-01 83.5% 95.7%