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SRR1747065_scaffold_0_prodigal-single.1__X__X__00394
Bact-VirSRR1747065_scaffold_0_prodigal-single.1__X__X__00394
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 17-105
Domain cluster:
rep: MG752970.1__AVH85358.1__RsoM2USA_430__00430__D11-89
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1g31A00 | 2.30.33.40 | Mainly Beta › Roll › 10 Kd Chaperonin, Protein Cpn10; Chain O › GroES chaperonin | 0.71 | 61.0 | 5.70e-01 | 91.0% | 90.7% |
| 1p3hB00 | 2.30.33.40 | Mainly Beta › Roll › 10 Kd Chaperonin, Protein Cpn10; Chain O › GroES chaperonin | 0.69 | 60.0 | 5.82e-01 | 92.1% | 90.8% |
| 1v1cA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.65 | 32.0 | 3.68e-01 | 76.4% | 61.8% |
| 2ke9A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.61 | 30.0 | 3.45e-01 | 73.0% | 62.7% |
| 4emhA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 34.0 | 3.92e-01 | 74.2% | 81.7% |
| 3a5zD02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 36.0 | 4.10e-01 | 86.5% | 84.4% |
| 2b39A13 | 2.40.50.120 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.58 | 46.0 | 3.97e-01 | 89.9% | 55.1% |
| 2d8iA01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.56 | 41.0 | 4.21e-01 | 91.0% | 79.5% |
| 2kqfA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.54 | 43.0 | 4.20e-01 | 91.0% | 81.2% |
| 1u5kA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 35.0 | 3.63e-01 | 88.8% | 75.6% |
| 4xhvA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.51 | 40.0 | 4.00e-01 | 89.9% | 81.9% |
| 2edvA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.51 | 36.0 | 3.55e-01 | 91.0% | 68.8% |
| 1egiA00 | 3.10.100.10 | Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A | 0.50 | 33.0 | 2.95e-01 | 82.0% | 45.7% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3359945 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.76 | 65.0 | 6.35e-01 | 91.0% | 83.5% |
| 5009504 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.65 | 60.0 | 4.65e-01 | 100.0% | 67.0% |
| 3689038 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.63 | 57.0 | 4.65e-01 | 100.0% | 58.8% |
| 4660315 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.63 | 57.0 | 4.40e-01 | 100.0% | 46.3% |
| 4319678 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.63 | 53.0 | 4.41e-01 | 91.0% | 81.3% |
| 2495096 | 236.1.1.0 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain | 0.63 | 57.0 | 4.35e-01 | 100.0% | 60.9% |
| 4547095 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.63 | 56.0 | 4.46e-01 | 100.0% | 50.6% |
| 3632476 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.60 | 55.0 | 4.26e-01 | 100.0% | 64.7% |
| 3474415 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.56 | 44.0 | 4.30e-01 | 92.1% | 76.8% |
| 3924448 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.53 | 41.0 | 3.80e-01 | 93.3% | 63.3% |
| 3925688 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.53 | 41.0 | 4.13e-01 | 92.1% | 81.1% |
| 3797696 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.53 | 44.0 | 4.24e-01 | 97.8% | 81.0% |
| 3936798 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.52 | 44.0 | 4.23e-01 | 97.8% | 81.0% |
| 4623074 | 1.1.7.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Lum_binding | 0.52 | 41.0 | 3.87e-01 | 86.5% | 84.5% |
| 3508660 | 3767.1.1.2 ↗ | a+b two layers › Giardia Dicer N-terminal domain › Giardia Dicer N-terminal domain › Giardia Dicer N-terminal domain › Dicer_platform | 0.52 | 41.0 | 3.50e-01 | 87.6% | 84.7% |
| 3573361 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.52 | 43.0 | 3.82e-01 | 97.8% | 63.0% |
| 3445055 | 4.1.1.158 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3444 | 0.51 | 34.0 | 3.28e-01 | 97.8% | 58.1% |
| 3599235 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.51 | 42.0 | 2.89e-01 | 93.3% | 45.3% |