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SRR1747065_scaffold_0_prodigal-single.1__X__X__00418
Bact-VirSRR1747065_scaffold_0_prodigal-single.1__X__X__00418
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-60_139-152
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1m9sA03 | 2.30.30.170 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 33.0 | 3.30e-01 | 89.2% | 45.3% |
| 4r80A00 | 3.10.450.630 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 43.0 | 4.26e-01 | 97.3% | 71.1% |
| 2f5kA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 34.0 | 3.98e-01 | 89.2% | 82.0% |
| 3vskA01 | 3.90.1310.10 | Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) | 0.59 | 46.0 | 3.80e-01 | 83.8% | 93.2% |
| 3lygA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 43.0 | 3.60e-01 | 91.9% | 49.2% |
| 3en8A01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 38.0 | 3.35e-01 | 97.3% | 48.2% |
| 4fr9A00 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 38.0 | 3.11e-01 | 98.6% | 39.0% |
| 2k54A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 40.0 | 3.44e-01 | 97.3% | 48.8% |
| 5jpnC02 | 2.40.50.120 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.51 | 39.0 | 3.21e-01 | 87.8% | 79.0% |
| 4u13A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 44.0 | 3.84e-01 | 94.6% | 66.1% |
| 4mb7A01 | 3.20.190.10 | Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal | 0.50 | 45.0 | 3.76e-01 | 100.0% | 74.6% |
| 1l0wA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.50 | 44.0 | 3.96e-01 | 100.0% | 76.4% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4993192 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.74 | 46.0 | 4.87e-01 | 95.9% | 70.8% |
| 4953814 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.73 | 46.0 | 5.00e-01 | 89.2% | 78.3% |
| 5014686 | 809.2.1.0 ↗ | a+b two layers › BLIP-like › BT0923-like › BT0923-like | 0.72 | 44.0 | 5.01e-01 | 91.9% | 81.8% |
| 4250029 | 243.3.1.10 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › YPEB_PepSY1-2 | 0.65 | 46.0 | 4.48e-01 | 97.3% | 67.5% |
| 3421095 | 3521.1.1.4 ↗ | a+b three layers › Polymerase basic protein 2 cap-binding domain › Polymerase basic protein 2 cap-binding domain › Polymerase basic protein 2 cap-binding domain › SWIM | 0.65 | 45.0 | 4.21e-01 | 95.9% | 58.9% |
| 5006286 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 33.0 | 3.51e-01 | 91.9% | 58.5% |
| 1140832 | 809.2.1.1 ↗ | a+b two layers › BLIP-like › BT0923-like › BT0923-like › PepSY_like | 0.58 | 35.0 | 3.82e-01 | 91.9% | 71.7% |
| 5080017 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.57 | 42.0 | 3.24e-01 | 91.9% | 35.6% |
| 3513207 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.52 | 45.0 | 3.99e-01 | 95.9% | 73.6% |
| 3247031 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.52 | 42.0 | 3.84e-01 | 91.9% | 89.5% |
| 4068524 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.52 | 40.0 | 3.44e-01 | 86.5% | 100.0% |
| 4114029 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.52 | 44.0 | 2.94e-01 | 93.2% | 96.1% |
| 3212496 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.51 | 32.0 | 3.04e-01 | 81.1% | 51.1% |
| 3586304 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.51 | 42.0 | 3.55e-01 | 91.9% | 70.0% |
| 4547794 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.51 | 39.0 | 3.37e-01 | 85.1% | 100.0% |
| 5035116 | 5.1.4.559 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta_propel | 0.50 | 44.0 | 2.59e-01 | 94.6% | 38.0% |
D2
medium
residues 61-138
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3zq5A03 | 3.30.450.270 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain | 0.50 | 36.0 | 3.06e-01 | 100.0% | 41.2% |