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SRR1747065_scaffold_0_prodigal-single.1__X__X__00431

Bact-Vir

SRR1747065_scaffold_0_prodigal-single.1__X__X__00431

Identity

Kingdom:
phage

Quality

62.3 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 32-163
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1hezE00 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.64 23.0 3.29e-01 90.2% 67.2%
3kzwA01 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.56 39.0 3.70e-01 71.2% 94.9%
4k90A01 3.10.170.10 Alpha Beta › Roll › Elastase; domain 1 › 0.53 49.0 4.21e-01 100.0% 95.0%
6abqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 33.0 3.70e-01 94.7% 80.2%
7dg2C01 1.10.10.1200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MAGE homology domain, winged helix WH1 motif 0.51 28.0 3.49e-01 77.3% 90.7%
2z5bA00 3.30.230.100 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.51 32.0 3.34e-01 89.4% 66.1%
3tcrA00 3.40.980.10 Alpha Beta › 3-Layer(aba) Sandwich › Molybdenum Cofactor Biosythetic Enzyme; Chain A › MoaB/Mog-like domain 0.50 44.0 4.15e-01 95.5% 94.3%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4967466 2498.1.1.0 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.69 42.0 4.68e-01 95.5% 76.2%
5078726 316.1.1.2 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 0.59 33.0 3.68e-01 81.1% 70.0%
3605008 316.1.1.5 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › RsfS 0.58 38.0 3.31e-01 81.8% 42.0%
3788758 63.1.1.1 beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › CIMR 0.57 32.0 4.04e-01 79.5% 91.3%
4991791 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 37.0 4.15e-01 93.2% 95.8%
1117778 3785.1.1.2 a+b three layers › Suppressor of Fused, C-terminal domain › Suppressor of Fused, C-terminal domain › Suppressor of Fused, C-terminal domain › SUFU_C 0.54 40.0 3.61e-01 94.7% 56.0%
3285546 211.1.1.0 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.52 36.0 3.91e-01 72.7% 96.4%
4991685 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 36.0 3.90e-01 90.2% 86.4%
3690642 7579.1.1.44 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_6 0.51 44.0 3.21e-01 94.7% 71.3%
3783380 2011.2.1.3 a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › Pept_tRNA_hydro 0.51 45.0 3.62e-01 95.5% 82.0%
5035015 2011.1.1.1 a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M14 0.50 43.0 3.51e-01 93.2% 100.0%