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SRR1747065_scaffold_10_prodigal-single.1__X__X__00029

Bact-Vir

SRR1747065_scaffold_10_prodigal-single.1__X__X__00029

Identity

Kingdom:
phage

Quality

90.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 28-91
PDB
Domain cluster: rep: aot2015-NO19_SRR1761693_USA_trim_clean_trim_clean_scaffold_5_curated_closed_complete_reversed_prodigal-single.1__X__X__00238__D41-104
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3bk2A03 3.10.20.580 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.61 43.0 3.78e-01 98.4% 48.5%
8p2aA01 3.90.1010.20 Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A › 0.57 42.0 3.86e-01 92.2% 59.8%
3g2bA00 1.10.10.1150 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Coenzyme PQQ synthesis protein D (PqqD) 0.56 39.0 3.48e-01 92.2% 52.2%
3r07C00 3.30.390.50 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain 0.52 38.0 3.44e-01 87.5% 56.8%
4xhvA00 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.51 38.0 3.49e-01 90.6% 58.5%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4988939 244.3.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU 0.61 38.0 3.73e-01 100.0% 57.1%
4215667 7579.1.1.98 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › PAF-AH_p_II, PETase 0.55 45.0 2.85e-01 95.3% 48.6%
5049620 304.106.1.0 ↗ a+b two layers › Alpha-beta plaits › Hypothetical protein PH1602 › Hypothetical protein PH1602 0.51 43.0 2.72e-01 98.4% 76.9%