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SRR1747065_scaffold_10_prodigal-single.1__X__X__00031
Bact-VirSRR1747065_scaffold_10_prodigal-single.1__X__X__00031
Identity
- Kingdom:
- phage
Quality
73.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 45-126
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4rv1F00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.63 | 48.0 | 3.08e-01 | 82.9% | 33.3% |
| 1ekeB02 | 1.10.10.460 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ribonuclease hii. Domain 2 | 0.61 | 34.0 | 4.20e-01 | 75.6% | 93.6% |
| 4fe7A03 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.60 | 44.0 | 4.02e-01 | 78.0% | 83.5% |
| 1z6mA02 | 1.10.1200.90 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › DsbA-like domain | 0.60 | 29.0 | 3.36e-01 | 92.7% | 62.3% |
| 1i39A02 | 1.10.10.460 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ribonuclease hii. Domain 2 | 0.57 | 31.0 | 3.89e-01 | 76.8% | 95.6% |
| 3d7iB00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.57 | 40.0 | 3.86e-01 | 74.4% | 81.6% |
| 3c65A00 | 3.30.420.340 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › UvrC, RNAse H endonuclease domain | 0.57 | 50.0 | 4.14e-01 | 100.0% | 70.2% |
| 3lpzA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 43.0 | 3.00e-01 | 82.9% | 31.1% |
| 2v79A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 39.0 | 3.50e-01 | 72.0% | 60.9% |
| 5lx8A00 | 1.25.40.390 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.53 | 46.0 | 2.88e-01 | 100.0% | 95.5% |
| 6bekD00 | 1.10.8.50 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.52 | 32.0 | 3.20e-01 | 72.0% | 56.2% |
| 3mn2A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.51 | 38.0 | 3.57e-01 | 81.7% | 86.1% |
| 3h27A00 | 3.50.50.100 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › | 0.51 | 44.0 | 2.87e-01 | 100.0% | 44.5% |
| 3hjlA01 | 1.10.220.30 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Flagellar motor switch protein FliG, alpha-alpha superhelical domain | 0.51 | 35.0 | 3.46e-01 | 100.0% | 67.1% |
| 3swhA01 | 1.10.357.50 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › | 0.51 | 37.0 | 3.05e-01 | 79.3% | 87.9% |
| 4eekA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.50 | 37.0 | 4.09e-01 | 97.6% | 98.5% |
| 8a0rA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.50 | 42.0 | 3.77e-01 | 100.0% | 89.2% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3164063 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.66 | 37.0 | 3.95e-01 | 81.7% | 62.9% |
| 1839954 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.66 | 48.0 | 4.99e-01 | 78.0% | 94.7% |
| 3486304 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.63 | 46.0 | 4.38e-01 | 78.0% | 100.0% |
| 3975521 | 101.28.1.1 ↗ | alpha arrays › HTH › helical bundles in FlhC-like proteins › helical bundles in FlhC-like proteins › FlhC | 0.63 | 40.0 | 4.63e-01 | 75.6% | 96.4% |
| 1598037 | 109.4.1.1268 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Arm, HEAT_2 | 0.63 | 47.0 | 4.21e-01 | 80.5% | 93.2% |
| 3784852 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 44.0 | 3.91e-01 | 76.8% | 56.7% |
| 4535106 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 45.0 | 4.65e-01 | 80.5% | 89.3% |
| 3600771 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 45.0 | 3.36e-01 | 81.7% | 37.2% |
| 4348165 | 101.1.1.2 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC | 0.59 | 42.0 | 4.66e-01 | 78.0% | 93.8% |
| 3185649 | 604.6.1.2 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › ANTH | 0.57 | 47.0 | 3.75e-01 | 91.5% | 84.7% |
| 4929481 | 102.2.1.0 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH | 0.57 | 37.0 | 3.82e-01 | 73.2% | 70.0% |
| 4377336 | 2484.1.1.174 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH | 0.54 | 46.0 | 3.99e-01 | 97.6% | 67.4% |
| 4333153 | 2484.1.1.174 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH | 0.53 | 45.0 | 3.96e-01 | 97.6% | 75.4% |
| 4292036 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.52 | 36.0 | 4.20e-01 | 89.0% | 100.0% |
| 3517850 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.52 | 38.0 | 2.68e-01 | 78.0% | 69.6% |
| 3966270 | 191.1.1.0 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain | 0.52 | 36.0 | 3.09e-01 | 72.0% | 75.4% |
| 3667742 | 2004.1.1.14 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU | 0.50 | 40.0 | 2.98e-01 | 90.2% | 55.4% |