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SRR1747065_scaffold_10_prodigal-single.1__X__X__00078
Bact-VirSRR1747065_scaffold_10_prodigal-single.1__X__X__00078
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-57
Domain cluster:
representative
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4exrA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 49.0 | 4.42e-01 | 86.5% | 73.2% |
| 3d9wA02 | 2.40.128.150 | Mainly Beta › Beta Barrel › Lipocalin › Cysteine proteinases | 0.62 | 47.0 | 3.86e-01 | 86.5% | 95.1% |
| 4bf3A00 | 2.30.31.50 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Borrelia outer surface protein E/F | 0.61 | 45.0 | 3.54e-01 | 86.5% | 92.5% |
| 4pmwA04 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 47.0 | 3.99e-01 | 86.5% | 63.7% |
| 4b08A01 | 2.40.50.730 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.60 | 42.0 | 3.63e-01 | 75.0% | 46.9% |
| 7bysA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.59 | 49.0 | 3.13e-01 | 100.0% | 48.5% |
| 2shpB03 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.58 | 43.0 | 2.79e-01 | 82.7% | 24.5% |
| 3k2zA02 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.58 | 50.0 | 3.88e-01 | 100.0% | 52.9% |
| 4e2tB00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.58 | 46.0 | 3.25e-01 | 90.4% | 36.7% |
| 3pufL00 | 2.40.128.680 | Mainly Beta › Beta Barrel › Lipocalin › | 0.57 | 47.0 | 3.69e-01 | 94.2% | 44.8% |
| 3fc7A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.57 | 42.0 | 3.49e-01 | 82.7% | 100.0% |
| 2vg9A00 | 2.60.120.180 | Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain | 0.56 | 41.0 | 2.84e-01 | 82.7% | 23.0% |
| 4oocA00 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.56 | 48.0 | 3.10e-01 | 100.0% | 40.3% |
| 1r0uA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.56 | 47.0 | 3.48e-01 | 96.2% | 75.4% |
| 1f39A00 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.55 | 46.0 | 3.86e-01 | 100.0% | 55.4% |
| 5b4wA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 44.0 | 2.70e-01 | 98.1% | 49.1% |
| 1v8cA02 | 3.30.1370.80 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Molybdopterin cofactor biosynthesis MoaD-related, C-terminal domain | 0.53 | 39.0 | 3.47e-01 | 80.8% | 78.8% |
| 2furB00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.53 | 39.0 | 2.74e-01 | 80.8% | 47.9% |
| 6fezA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.53 | 46.0 | 3.78e-01 | 98.1% | 90.4% |
| 1nf7A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.53 | 42.0 | 2.51e-01 | 90.4% | 71.4% |
| 2cztA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.53 | 42.0 | 3.09e-01 | 90.4% | 74.2% |
| 5lohB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 44.0 | 3.95e-01 | 96.2% | 86.5% |
| 1cqkA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 38.0 | 3.17e-01 | 80.8% | 92.1% |
| 2x9aA00 | 2.30.27.10 | Mainly Beta › Roll › Phage FD Coat Protein, Membrane penetration domain › Phage FD Coat Protein,Membrane penetration domain | 0.53 | 38.0 | 3.68e-01 | 96.2% | 67.2% |
| 2dfkC02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 40.0 | 3.04e-01 | 88.5% | 63.8% |
| 2kd2A01 | 2.40.128.180 | Mainly Beta › Beta Barrel › Lipocalin › | 0.52 | 39.0 | 3.37e-01 | 82.7% | 81.0% |
| 4indA01 | 2.60.120.1320 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 37.0 | 2.78e-01 | 78.8% | 84.2% |
| 2fm8B00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.52 | 44.0 | 3.37e-01 | 98.1% | 63.2% |
| 5w8mA00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.52 | 42.0 | 3.01e-01 | 100.0% | 95.4% |
| 6ap4B02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.51 | 41.0 | 3.18e-01 | 98.1% | 86.5% |
| 1ntyA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 40.0 | 3.23e-01 | 96.2% | 65.3% |
| 3r5lA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.51 | 38.0 | 3.20e-01 | 92.3% | 93.1% |
| 6lf2B01 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.51 | 39.0 | 3.16e-01 | 94.2% | 78.2% |
| 2rgnB02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 40.0 | 3.28e-01 | 100.0% | 67.5% |
| 2fboJ02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 37.0 | 2.97e-01 | 82.7% | 93.8% |
| 2k2jA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.50 | 40.0 | 3.23e-01 | 96.2% | 85.5% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3957641 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.69 | 52.0 | 5.14e-01 | 98.1% | 76.4% |
| 3215886 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.66 | 51.0 | 3.78e-01 | 88.5% | 79.3% |
| 3588678 | 243.3.1.3 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY | 0.63 | 50.0 | 4.64e-01 | 86.5% | 81.5% |
| 3199439 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.62 | 48.0 | 3.35e-01 | 88.5% | 42.6% |
| 3815852 | 60.1.1.10 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › SPOC domain › PF28898 | 0.61 | 51.0 | 3.83e-01 | 96.2% | 62.2% |
| 3772065 | 220.1.1.132 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › KRIT1_FRMD8_FERM_C | 0.61 | 47.0 | 3.77e-01 | 88.5% | 76.5% |
| 3737184 | 7502.1.1.2 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Brix | 0.60 | 44.0 | 2.89e-01 | 80.8% | 33.6% |
| 3435375 | 60.1.1.10 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › SPOC domain › PF28898 | 0.60 | 50.0 | 3.81e-01 | 96.2% | 69.2% |
| 3965912 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.58 | 42.0 | 3.53e-01 | 80.8% | 85.3% |
| 3271442 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.57 | 48.0 | 3.56e-01 | 98.1% | 50.7% |
| 3511457 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.57 | 43.0 | 3.36e-01 | 88.5% | 77.0% |
| 3545249 | 220.1.1.12 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Myosin_TH1 | 0.56 | 44.0 | 3.11e-01 | 98.1% | 48.6% |
| 4007999 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.55 | 46.0 | 3.53e-01 | 100.0% | 49.6% |
| 3504519 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.55 | 47.0 | 3.60e-01 | 100.0% | 92.3% |
| 3263391 | 220.1.1.66 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH | 0.55 | 42.0 | 3.56e-01 | 96.2% | 48.2% |
| 3985863 | 219.1.1.109 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Toxin_15 | 0.54 | 41.0 | 2.82e-01 | 84.6% | 51.2% |
| 3411018 | 3459.1.1.1 ↗ | beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › FAIM1 | 0.54 | 40.0 | 3.30e-01 | 94.2% | 43.0% |
| 3516502 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.54 | 41.0 | 3.77e-01 | 86.5% | 81.4% |
| 3626506 | 220.1.1.66 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH | 0.54 | 42.0 | 3.28e-01 | 96.2% | 51.4% |
| 4190110 | 269.1.1.2 ↗ | a+b complex topology › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen_C,Fib_alpha | 0.53 | 42.0 | 2.60e-01 | 92.3% | 65.1% |
| 3822963 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.53 | 42.0 | 3.31e-01 | 96.2% | 46.2% |
| 3283851 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.53 | 41.0 | 3.23e-01 | 92.3% | 88.5% |
| 3261845 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 40.0 | 2.55e-01 | 94.2% | 69.0% |
| 5071939 | 1.1.5.31 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_ox_2 | 0.52 | 40.0 | 3.04e-01 | 94.2% | 86.2% |
| 4982411 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.52 | 43.0 | 3.32e-01 | 98.1% | 87.7% |
| 3164508 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.52 | 43.0 | 3.07e-01 | 96.2% | 71.2% |
| 3640540 | 5.1.4.97 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Rrn6_beta-prop | 0.52 | 42.0 | 2.54e-01 | 100.0% | 34.1% |
| 2141304 | 227.1.1.7 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 | 0.51 | 41.0 | 3.23e-01 | 98.1% | 91.6% |
| 4998991 | 1.1.5.31 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_ox_2 | 0.51 | 43.0 | 3.26e-01 | 98.1% | 89.3% |
| 4398329 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.51 | 42.0 | 3.13e-01 | 98.1% | 48.0% |
| 4977860 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.51 | 44.0 | 2.59e-01 | 98.1% | 77.3% |
| 3648413 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 34.0 | 2.87e-01 | 71.2% | 45.6% |
| 4960378 | 1.1.5.31 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_ox_2 | 0.51 | 41.0 | 3.11e-01 | 98.1% | 83.4% |
| 2387800 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.51 | 42.0 | 3.11e-01 | 98.1% | 48.0% |
| 3412365 | 10.21.1.1 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in ADAMTS13 › Jelly-roll domain in ADAMTS13 › ADAMTS_spacer1 | 0.50 | 39.0 | 2.89e-01 | 82.7% | 77.0% |
| 4947833 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.50 | 41.0 | 3.28e-01 | 98.1% | 81.6% |
| 1789717 | 719.1.1.0 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain | 0.50 | 41.0 | 3.78e-01 | 92.3% | 95.7% |
D2
medium
residues 62-122
Domain cluster:
rep: MK448740.1__QBX17560.1__Javan367_0025__00025__D3-70
CATH (69)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1h3zA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 55.0 | 4.61e-01 | 90.2% | 92.6% |
| 3pfsB00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 55.0 | 4.34e-01 | 90.2% | 93.8% |
| 2xk0A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 54.0 | 5.22e-01 | 93.4% | 76.8% |
| 1f39A00 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.67 | 53.0 | 4.59e-01 | 90.2% | 58.4% |
| 4ld6A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 58.0 | 4.69e-01 | 100.0% | 82.9% |
| 4p5nA00 | 2.30.30.1060 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 58.0 | 5.50e-01 | 100.0% | 98.6% |
| 6my0A02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 48.0 | 4.76e-01 | 80.3% | 87.7% |
| 1khcA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 56.0 | 5.50e-01 | 96.7% | 100.0% |
| 2gfuA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 54.0 | 4.19e-01 | 93.4% | 72.4% |
| 1i9gA01 | 3.10.330.20 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.64 | 49.0 | 4.91e-01 | 83.6% | 100.0% |
| 4xtvB02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 46.0 | 5.01e-01 | 77.0% | 100.0% |
| 4dt4A02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.64 | 43.0 | 4.44e-01 | 70.5% | 77.2% |
| 4ii1A02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 49.0 | 5.12e-01 | 85.2% | 100.0% |
| 4a0tA03 | 2.60.320.30 | Mainly Beta › Sandwich › mini-chromosome maintenance (MCM) complex, domain 2 › | 0.63 | 51.0 | 4.57e-01 | 91.8% | 90.0% |
| 2ej9A02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 45.0 | 4.87e-01 | 77.0% | 100.0% |
| 7cfdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 51.0 | 4.87e-01 | 91.8% | 84.9% |
| 4a53A01 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 52.0 | 5.19e-01 | 96.7% | 90.3% |
| 2gfaB01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 50.0 | 4.97e-01 | 86.9% | 100.0% |
| 2l89A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 49.0 | 4.10e-01 | 86.9% | 87.0% |
| 4f7uG00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 54.0 | 5.21e-01 | 96.7% | 100.0% |
| 5ccbA01 | 3.10.330.20 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.62 | 48.0 | 4.60e-01 | 85.2% | 93.1% |
| 1o54A01 | 3.10.330.20 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.62 | 51.0 | 4.89e-01 | 91.8% | 98.6% |
| 4chjA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.62 | 47.0 | 3.78e-01 | 83.6% | 70.2% |
| 3k2zA02 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.61 | 48.0 | 3.94e-01 | 88.5% | 48.7% |
| 4m7dA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 51.0 | 5.07e-01 | 93.4% | 98.5% |
| 2icuA00 | 3.90.1680.10 | Alpha Beta › Alpha-Beta Complex › hypothetical protein yedk fold › SOS response associated peptidase-like | 0.61 | 46.0 | 3.25e-01 | 85.2% | 56.2% |
| 1boqA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.61 | 48.0 | 4.04e-01 | 88.5% | 59.8% |
| 3h8zA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 48.0 | 4.73e-01 | 86.9% | 84.4% |
| 1y96D00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 51.0 | 4.67e-01 | 96.7% | 79.5% |
| 1y96A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 52.0 | 4.68e-01 | 98.4% | 76.7% |
| 1u1sA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 50.0 | 4.91e-01 | 96.7% | 87.9% |
| 2e12A00 | 2.30.30.720 | Mainly Beta › Roll › SH3 type barrels. › Protein of unknown function (DUF3247) | 0.60 | 51.0 | 4.46e-01 | 96.7% | 80.6% |
| 4zciA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.60 | 49.0 | 4.17e-01 | 91.8% | 88.1% |
| 1hpgA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.60 | 47.0 | 4.05e-01 | 86.9% | 63.6% |
| 3kl9A02 | 2.40.30.40 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 | 0.59 | 49.0 | 4.69e-01 | 95.1% | 87.8% |
| 3ic8A01 | 3.40.30.110 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › | 0.59 | 50.0 | 3.65e-01 | 96.7% | 35.6% |
| 1lvoA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.59 | 47.0 | 4.17e-01 | 86.9% | 60.2% |
| 1yloE02 | 2.40.30.40 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 | 0.59 | 49.0 | 4.52e-01 | 96.7% | 83.3% |
| 4he6A00 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.59 | 48.0 | 4.29e-01 | 91.8% | 92.1% |
| 4c92G00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 50.0 | 4.72e-01 | 96.7% | 92.0% |
| 1kq1H00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 48.0 | 4.78e-01 | 95.1% | 89.4% |
| 1d3bB00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 50.0 | 4.64e-01 | 98.4% | 98.8% |
| 1wgqA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.58 | 42.0 | 3.59e-01 | 78.7% | 72.5% |
| 2kr7A02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.58 | 40.0 | 4.11e-01 | 70.5% | 77.2% |
| 3hu1A01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.58 | 50.0 | 4.35e-01 | 98.4% | 67.7% |
| 2greF02 | 2.40.30.40 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 | 0.58 | 48.0 | 4.51e-01 | 95.1% | 82.1% |
| 1m5q101 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 49.0 | 4.76e-01 | 96.7% | 95.6% |
| 2elbA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 44.0 | 3.78e-01 | 85.2% | 80.4% |
| 1mrzB02 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.57 | 47.0 | 3.93e-01 | 93.4% | 68.8% |
| 3tzgA00 | 2.40.160.150 | Mainly Beta › Beta Barrel › Porin › | 0.57 | 40.0 | 2.81e-01 | 78.7% | 58.6% |
| 2d7eA01 | 3.40.1440.60 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › PriA, 3(prime) DNA-binding domain | 0.56 | 46.0 | 4.03e-01 | 95.1% | 60.0% |
| 2mysA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.56 | 40.0 | 4.38e-01 | 78.7% | 97.9% |
| 2nr4A01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.56 | 48.0 | 3.76e-01 | 98.4% | 48.9% |
| 2x4jA01 | 2.30.30.600 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 43.0 | 3.83e-01 | 93.4% | 78.4% |
| 4wqmA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.55 | 45.0 | 3.93e-01 | 93.4% | 94.9% |
| 1ifrA00 | 2.60.40.1260 | Mainly Beta › Sandwich › Immunoglobulin-like › Lamin Tail domain | 0.55 | 44.0 | 3.71e-01 | 91.8% | 89.4% |
| 2k2jA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 39.0 | 3.34e-01 | 78.7% | 80.3% |
| 2imlA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.55 | 43.0 | 3.58e-01 | 86.9% | 59.3% |
| 2hrvA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.55 | 43.0 | 3.81e-01 | 88.5% | 71.6% |
| 2psbA00 | 3.50.90.10 | Alpha Beta › 3-Layer(bba) Sandwich › YerB-like fold › YerB-like | 0.55 | 45.0 | 2.98e-01 | 95.1% | 83.1% |
| 6b9tF01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 43.0 | 3.45e-01 | 88.5% | 75.2% |
| 2piaA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 46.0 | 3.93e-01 | 98.4% | 73.1% |
| 2ldmA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 38.0 | 4.04e-01 | 78.7% | 94.3% |
| 2f4nB02 | 2.40.30.90 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like | 0.53 | 43.0 | 3.83e-01 | 93.4% | 83.0% |
| 2z3gB00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.53 | 38.0 | 3.08e-01 | 78.7% | 41.7% |
| 6vtmB00 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.52 | 43.0 | 3.74e-01 | 93.4% | 96.9% |
| 3bcwA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 43.0 | 3.70e-01 | 100.0% | 88.5% |
| 5xctB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 39.0 | 3.37e-01 | 91.8% | 82.1% |
| 2eixA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.50 | 43.0 | 3.67e-01 | 100.0% | 73.6% |
ECOD (76)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3570399 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 60.0 | 5.88e-01 | 95.1% | 100.0% |
| 3586487 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 54.0 | 4.80e-01 | 85.2% | 64.7% |
| 4280097 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.68 | 54.0 | 5.52e-01 | 96.7% | 90.0% |
| 3296865 | 4.1.1.237 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 | 0.68 | 59.0 | 4.87e-01 | 95.1% | 60.0% |
| 3786412 | 4.1.1.344 ↗ | beta barrels › SH3 › SH3 › SH3 › PF31193 | 0.68 | 53.0 | 4.90e-01 | 86.9% | 93.8% |
| 3302829 | 4.1.1.237 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 | 0.67 | 60.0 | 5.89e-01 | 98.4% | 100.0% |
| 3768094 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.66 | 54.0 | 4.50e-01 | 90.2% | 54.3% |
| 3354387 | 4.1.1.217 ↗ | beta barrels › SH3 › SH3 › SH3 › zf-CCCH_4 | 0.66 | 52.0 | 4.67e-01 | 86.9% | 92.9% |
| 4000280 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 51.0 | 5.36e-01 | 85.2% | 98.2% |
| 3913687 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.65 | 52.0 | 4.62e-01 | 88.5% | 68.9% |
| 4607208 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.65 | 52.0 | 4.15e-01 | 88.5% | 45.5% |
| 3220929 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 56.0 | 5.24e-01 | 98.4% | 92.0% |
| 3507639 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.64 | 56.0 | 5.33e-01 | 96.7% | 94.3% |
| 3625817 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.64 | 53.0 | 4.91e-01 | 91.8% | 88.7% |
| 4451993 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.64 | 53.0 | 5.40e-01 | 96.7% | 95.0% |
| 3473981 | 4.1.1.12 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP | 0.64 | 55.0 | 4.38e-01 | 96.7% | 95.2% |
| 3602921 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 48.0 | 5.03e-01 | 83.6% | 98.2% |
| 1167052 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 54.0 | 5.50e-01 | 96.7% | 100.0% |
| 5053906 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.63 | 54.0 | 5.43e-01 | 95.1% | 98.3% |
| 4259069 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 51.0 | 3.62e-01 | 91.8% | 30.5% |
| 4293453 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 55.0 | 5.04e-01 | 98.4% | 81.2% |
| 3720815 | 4.1.1.225 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7025 | 0.62 | 53.0 | 4.31e-01 | 95.1% | 77.4% |
| 3907190 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.62 | 56.0 | 4.80e-01 | 100.0% | 73.7% |
| 3389662 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.62 | 54.0 | 4.95e-01 | 96.7% | 86.3% |
| 3707634 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 51.0 | 5.34e-01 | 90.2% | 100.0% |
| 3839016 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.61 | 53.0 | 5.20e-01 | 98.4% | 90.8% |
| 3712219 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.61 | 48.0 | 4.79e-01 | 88.5% | 96.9% |
| 4197746 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.61 | 49.0 | 4.43e-01 | 90.2% | 85.9% |
| 4662294 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 49.0 | 5.09e-01 | 93.4% | 100.0% |
| 4937158 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 51.0 | 5.18e-01 | 95.1% | 93.3% |
| 4205165 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.61 | 50.0 | 4.53e-01 | 93.4% | 100.0% |
| 4658938 | 4.1.1.96 ↗ | beta barrels › SH3 › SH3 › SH3 › Hfq | 0.61 | 51.0 | 4.51e-01 | 96.7% | 64.4% |
| 4927654 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 51.0 | 5.03e-01 | 96.7% | 98.5% |
| 4575051 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.60 | 52.0 | 4.81e-01 | 98.4% | 86.3% |
| 5013683 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 50.0 | 5.04e-01 | 98.4% | 96.7% |
| 4340758 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 50.0 | 4.84e-01 | 93.4% | 98.6% |
| 3972307 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.60 | 48.0 | 4.85e-01 | 98.4% | 88.3% |
| 157624 | 4.1.1.47 ↗ | beta barrels › SH3 › SH3 › SH3 › Gemin6 | 0.60 | 52.0 | 4.68e-01 | 98.4% | 76.7% |
| 3254541 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.60 | 43.0 | 3.65e-01 | 78.7% | 79.1% |
| 4953913 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.60 | 51.0 | 5.15e-01 | 98.4% | 98.3% |
| 3210702 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.59 | 47.0 | 3.07e-01 | 88.5% | 28.6% |
| 4071971 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.59 | 47.0 | 3.61e-01 | 88.5% | 39.3% |
| 4943366 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.59 | 49.0 | 4.44e-01 | 93.4% | 90.6% |
| 5079674 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.59 | 48.0 | 4.47e-01 | 88.5% | 94.7% |
| 5076995 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.59 | 48.0 | 4.46e-01 | 91.8% | 93.8% |
| 3936053 | 4.1.1.71 ↗ | beta barrels › SH3 › SH3 › SH3 › Gemin7 | 0.59 | 49.0 | 4.77e-01 | 95.1% | 92.9% |
| 4521518 | 1.1.7.121 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Phage_BR0599 | 0.59 | 48.0 | 3.98e-01 | 93.4% | 64.3% |
| 3973332 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.59 | 48.0 | 4.53e-01 | 93.4% | 94.7% |
| 5007131 | 1.1.7.28 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel | 0.58 | 51.0 | 4.39e-01 | 96.7% | 82.1% |
| 3943690 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.58 | 45.0 | 4.68e-01 | 95.1% | 89.7% |
| 5081809 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.58 | 44.0 | 4.38e-01 | 83.6% | 95.4% |
| 3266483 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.58 | 50.0 | 4.17e-01 | 98.4% | 68.2% |
| 3227009 | 4.1.1.71 ↗ | beta barrels › SH3 › SH3 › SH3 › Gemin7 | 0.58 | 48.0 | 4.56e-01 | 93.4% | 82.7% |
| 4166012 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.58 | 49.0 | 4.61e-01 | 98.4% | 77.3% |
| 4478186 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 40.0 | 4.45e-01 | 73.8% | 100.0% |
| 4217174 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.58 | 47.0 | 4.51e-01 | 91.8% | 95.7% |
| 4350337 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.58 | 47.0 | 4.40e-01 | 90.2% | 97.3% |
| 3971321 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.58 | 49.0 | 4.79e-01 | 98.4% | 97.1% |
| 4975808 | 1.1.7.22 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Peptidase_M42 | 0.57 | 46.0 | 4.17e-01 | 93.4% | 86.7% |
| 1175750 | 284.4.1.0 ↗ | a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain | 0.57 | 40.0 | 3.72e-01 | 73.8% | 59.7% |
| 4890345 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.57 | 47.0 | 4.23e-01 | 91.8% | 88.2% |
| 4083044 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.57 | 47.0 | 4.39e-01 | 95.1% | 74.7% |
| 3740204 | 4.1.1.71 ↗ | beta barrels › SH3 › SH3 › SH3 › Gemin7 | 0.56 | 49.0 | 4.47e-01 | 100.0% | 82.4% |
| 3945528 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.56 | 46.0 | 4.30e-01 | 93.4% | 93.8% |
| 4080130 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.56 | 47.0 | 4.45e-01 | 98.4% | 77.3% |
| 3567641 | 4187.2.1.1 ↗ | a+b two layers › NosL/MerB-like › DUF2233 › DUF2233 › NAGPA | 0.56 | 46.0 | 4.10e-01 | 93.4% | 93.3% |
| 4799851 | 4187.2.1.1 ↗ | a+b two layers › NosL/MerB-like › DUF2233 › DUF2233 › NAGPA | 0.56 | 43.0 | 4.36e-01 | 85.2% | 88.7% |
| 4064427 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.55 | 46.0 | 4.16e-01 | 96.7% | 72.2% |
| 5000971 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.55 | 46.0 | 4.15e-01 | 98.4% | 78.9% |
| 3597282 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.55 | 44.0 | 4.15e-01 | 93.4% | 95.0% |
| 4944696 | 1.1.7.138 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › NAD_binding_1 | 0.54 | 45.0 | 3.93e-01 | 98.4% | 76.0% |
| 4366786 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.53 | 44.0 | 3.78e-01 | 98.4% | 69.1% |
| 4295923 | 11.1.4.25 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › PapC_C | 0.53 | 36.0 | 3.28e-01 | 70.5% | 100.0% |
| 4932697 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 43.0 | 4.30e-01 | 95.1% | 100.0% |
| 4940416 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.52 | 40.0 | 3.74e-01 | 100.0% | 66.3% |
| 3198544 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.51 | 43.0 | 3.57e-01 | 98.4% | 73.9% |