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SRR1747065_scaffold_10_prodigal-single.1__X__X__00109
Bact-VirSRR1747065_scaffold_10_prodigal-single.1__X__X__00109
Identity
- Kingdom:
- phage
Quality
70.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-96
Domain cluster:
rep: OQ850971__WLW38174.1__X__00003__D32-114
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1svbA01 | 2.60.98.10 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Tick-borne Encephalitis virus Glycoprotein, domain 1 | 0.74 | 68.0 | 6.02e-01 | 100.0% | 90.4% |
| 6iw2A01 | 2.60.98.10 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Tick-borne Encephalitis virus Glycoprotein, domain 1 | 0.72 | 67.0 | 5.90e-01 | 100.0% | 90.2% |
| 3girA02 | 3.30.70.1400 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aminomethyltransferase beta-barrel domains | 0.59 | 39.0 | 4.05e-01 | 94.7% | 72.1% |
| 1v5vA02 | 3.30.70.1400 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aminomethyltransferase beta-barrel domains | 0.59 | 38.0 | 3.91e-01 | 94.7% | 67.4% |
| 1yx2A02 | 3.30.70.1400 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aminomethyltransferase beta-barrel domains | 0.59 | 38.0 | 4.01e-01 | 94.7% | 72.1% |
| 1wlgA02 | 2.60.98.20 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Flagellar hook protein FlgE | 0.58 | 49.0 | 4.35e-01 | 93.7% | 93.6% |
| 6j7xC01 | 3.30.450.50 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin domain | 0.57 | 43.0 | 3.83e-01 | 94.7% | 55.7% |
| 1fo0B00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 43.0 | 4.12e-01 | 100.0% | 71.4% |
| 4k3yC00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.55 | 45.0 | 3.17e-01 | 94.7% | 91.3% |
| 2ehbD00 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.54 | 39.0 | 3.60e-01 | 94.7% | 57.1% |
| 1ry9A00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.54 | 38.0 | 3.43e-01 | 73.7% | 87.2% |
| 5x6vG00 | 3.30.450.190 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.53 | 44.0 | 3.95e-01 | 94.7% | 64.4% |
| 1pj5A04 | 3.30.70.1400 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aminomethyltransferase beta-barrel domains | 0.53 | 34.0 | 3.22e-01 | 93.7% | 51.7% |
| 6h5bB01 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.53 | 41.0 | 3.77e-01 | 94.7% | 64.7% |
| 3jtzA00 | 3.30.160.390 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Integrase, DNA-binding domain | 0.52 | 37.0 | 4.00e-01 | 73.7% | 93.5% |
| 1zldA00 | 2.60.40.1920 | Mainly Beta › Sandwich › Immunoglobulin-like › Proteinaceous host-selective toxin ToxA | 0.52 | 46.0 | 4.49e-01 | 94.7% | 97.1% |
| 1h10A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 39.0 | 3.69e-01 | 80.0% | 88.0% |
| 6mlyB01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.52 | 41.0 | 3.12e-01 | 89.5% | 90.1% |
| 2k5gA01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 47.0 | 3.73e-01 | 97.9% | 67.2% |
| 3w9kA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 44.0 | 3.94e-01 | 94.7% | 71.1% |
| 4m0hA01 | 2.60.120.1440 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 43.0 | 3.84e-01 | 95.8% | 67.6% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4943848 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.76 | 39.0 | 4.12e-01 | 94.7% | 55.3% |
| 146391 | 5090.1.1.1 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › Flavi_glycoprot | 0.68 | 63.0 | 5.93e-01 | 100.0% | 91.9% |
| 5043037 | 5090.1.1.0 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains | 0.66 | 59.0 | 5.79e-01 | 94.7% | 93.0% |
| 3718240 | 331.1.1.12 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › DUF155 | 0.61 | 38.0 | 3.46e-01 | 93.7% | 46.2% |
| 3222851 | 2011.1.1.7 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M18 | 0.59 | 49.0 | 3.43e-01 | 91.6% | 42.2% |
| 4646107 | 5.1.4.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 | 0.56 | 47.0 | 3.26e-01 | 94.7% | 94.0% |
| 3523657 | 5.1.4.18 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › EPTP | 0.56 | 47.0 | 3.19e-01 | 94.7% | 88.3% |
| 3228995 | 2484.1.1.200 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH | 0.54 | 48.0 | 3.00e-01 | 100.0% | 17.9% |
| 3275667 | 5.1.5.76 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, Beta-prop_NOL10_N | 0.54 | 47.0 | 3.12e-01 | 96.8% | 78.7% |
| 3820988 | 220.1.1.11 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Rpn13_ADRM1_Pru | 0.54 | 39.0 | 3.51e-01 | 76.8% | 83.0% |
| 5078228 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.53 | 39.0 | 3.23e-01 | 75.8% | 53.1% |
| 3558744 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.53 | 39.0 | 3.64e-01 | 80.0% | 82.4% |
| 1002433 | 11.10.1.3 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › Toxin_ToxA | 0.52 | 45.0 | 4.45e-01 | 94.7% | 95.1% |
| 3796100 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.52 | 39.0 | 3.39e-01 | 80.0% | 68.7% |
| 1066050 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.51 | 38.0 | 3.54e-01 | 80.0% | 93.4% |
| 3563547 | 220.1.1.27 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_RBD | 0.50 | 37.0 | 3.45e-01 | 78.9% | 88.8% |
| 1291144 | 9.1.1.27 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › MoaF_C | 0.50 | 42.0 | 3.89e-01 | 88.4% | 83.8% |
| 3279448 | 9.1.1.17 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › MoaF | 0.50 | 42.0 | 3.71e-01 | 88.4% | 72.9% |
| 3684518 | 304.107.1.0 ↗ | a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain | 0.50 | 43.0 | 4.06e-01 | 93.7% | 77.4% |
| 3944596 | 9.1.1.27 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › MoaF_C | 0.50 | 42.0 | 3.90e-01 | 88.4% | 85.2% |