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SRR1747065_scaffold_10_prodigal-single.1__X__X__00111

Bact-Vir

SRR1747065_scaffold_10_prodigal-single.1__X__X__00111

Identity

Kingdom:
phage

Quality

67.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 298-408
PDB
Domain cluster: representative
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ewkA01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.56 32.0 3.34e-01 88.3% 59.2%
7s7rA01 2.60.40.2860 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 38.0 3.57e-01 71.2% 100.0%
4f3lA03 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.55 32.0 3.19e-01 88.3% 51.6%
7kjhC01 2.60.40.2860 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 37.0 3.61e-01 71.2% 100.0%
4ufcA01 2.70.98.50 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans 0.53 42.0 3.05e-01 85.6% 63.2%
4q52A00 2.60.40.3910 Mainly Beta › Sandwich › Immunoglobulin-like › Inclusion body protein 0.53 37.0 3.22e-01 72.1% 100.0%
4ffuB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.51 40.0 3.65e-01 84.7% 86.7%
3exzB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.51 39.0 3.59e-01 82.0% 87.1%
3lbeB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.50 42.0 4.10e-01 90.1% 85.5%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3301984 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.62 32.0 4.36e-01 90.1% 100.0%
3503098 223.1.1.13 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.57 34.0 3.62e-01 88.3% 67.4%
4030631 7579.1.1.0 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases 0.54 48.0 3.95e-01 100.0% 78.0%
3988719 12.3.1.21 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hyd_65N_2 0.52 41.0 3.21e-01 84.7% 98.0%
3723082 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.51 45.0 3.40e-01 100.0% 38.6%
D2 medium residues 14-45
PDB
D3 medium residues 163-261
PDB
Domain cluster: rep: MW960037.1__QWY83581.1__X__00027__D159-241