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SRR1747065_scaffold_10_prodigal-single.1__X__X__00128

Bact-Vir

SRR1747065_scaffold_10_prodigal-single.1__X__X__00128

Identity

Kingdom:
phage

Quality

79.1 mean pLDDT

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 34-156
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wv3A02 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.57 33.0 3.54e-01 100.0% 64.2%
4ba0A03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.52 23.0 3.10e-01 89.4% 88.2%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3820282 376.1.2.16 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1-like_CT 0.59 24.0 3.63e-01 82.1% 100.0%
3805371 376.1.2.16 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1-like_CT 0.56 26.0 3.50e-01 82.1% 86.7%
3817641 376.1.2.16 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1-like_CT 0.55 26.0 3.43e-01 73.2% 89.7%
3833660 377.1.1.47 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › C1-like_CT 0.54 28.0 3.67e-01 82.9% 93.8%
3809116 377.1.1.47 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › C1-like_CT 0.53 26.0 3.54e-01 81.3% 100.0%
3811435 376.1.2.16 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1-like_CT 0.53 26.0 3.32e-01 82.1% 84.6%
3822096 376.1.2.16 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1-like_CT 0.52 25.0 3.46e-01 82.1% 100.0%
3175310 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 38.0 3.24e-01 75.6% 94.4%
3814728 376.1.2.16 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1-like_CT 0.51 26.0 3.37e-01 82.9% 95.0%
3255471 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 30.0 3.65e-01 91.1% 97.3%