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SRR1747065_scaffold_10_prodigal-single.1__X__X__00143
Bact-VirSRR1747065_scaffold_10_prodigal-single.1__X__X__00143
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 16-99
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00166.27 best | Cpn10 | 24.0 | 4.50e-05 | 90.5% | 81.7% |
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6mrc100 | 2.30.33.40 | Mainly Beta › Roll › 10 Kd Chaperonin, Protein Cpn10; Chain O › GroES chaperonin | 0.70 | 61.0 | 5.74e-01 | 94.0% | 81.0% |
| 1p3hB00 | 2.30.33.40 | Mainly Beta › Roll › 10 Kd Chaperonin, Protein Cpn10; Chain O › GroES chaperonin | 0.67 | 58.0 | 5.52e-01 | 94.0% | 83.7% |
| 2v1qA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.62 | 34.0 | 3.94e-01 | 71.4% | 75.0% |
| 6vlfA03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.60 | 32.0 | 3.76e-01 | 70.2% | 74.1% |
| 1tg0A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.60 | 34.0 | 3.76e-01 | 78.6% | 69.7% |
| 2jxbA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.59 | 33.0 | 3.33e-01 | 72.6% | 52.3% |
| 2egcA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.59 | 35.0 | 3.71e-01 | 91.7% | 66.7% |
| 2creA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.59 | 35.0 | 3.81e-01 | 73.8% | 70.4% |
| 2kxcA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.57 | 35.0 | 3.80e-01 | 90.5% | 74.6% |
| 3uogA01 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.57 | 51.0 | 3.90e-01 | 100.0% | 53.3% |
| 1lckA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.57 | 31.0 | 3.55e-01 | 70.2% | 72.9% |
| 1x43A01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 32.0 | 3.59e-01 | 70.2% | 74.2% |
| 2kctA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 39.0 | 3.85e-01 | 76.2% | 90.8% |
| 1awoA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.52 | 29.0 | 3.25e-01 | 89.3% | 73.7% |
| 2egeA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.50 | 33.0 | 3.52e-01 | 82.1% | 76.0% |
| 2vknA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.50 | 37.0 | 4.12e-01 | 82.1% | 98.5% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3632301 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.70 | 47.0 | 3.91e-01 | 79.8% | 40.7% |
| 4024554 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.67 | 56.0 | 5.38e-01 | 91.7% | 83.7% |
| 3225762 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.61 | 34.0 | 3.63e-01 | 73.8% | 62.7% |
| 3771628 | 189.1.1.0 ↗ | alpha bundles › GTPase activation domain, GAP › GTPase activation domain, GAP › GTPase activation domain, GAP | 0.59 | 35.0 | 2.35e-01 | 71.4% | 15.8% |
| 4003171 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.58 | 33.0 | 3.41e-01 | 72.6% | 57.5% |