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SRR1747065_scaffold_10_prodigal-single.1__X__X__00178
Bact-VirSRR1747065_scaffold_10_prodigal-single.1__X__X__00178
Identity
- Kingdom:
- phage
Quality
62.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 12-86
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4czwA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.56 | 47.0 | 3.04e-01 | 97.3% | 49.2% |
| 3axsA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 42.0 | 2.85e-01 | 93.3% | 35.7% |
| 2hg6A00 | 3.90.1650.10 | Alpha Beta › Alpha-Beta Complex › PA1123-like › PA1123-like | 0.52 | 35.0 | 3.10e-01 | 76.0% | 48.1% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4518612 | 2003.1.4.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › SIR2 | 0.60 | 35.0 | 2.42e-01 | 85.3% | 16.5% |
| 3609075 | 375.1.1.4 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-RanBP | 0.59 | 42.0 | 3.80e-01 | 74.7% | 69.0% |
| 4172488 | 2492.1.1.47 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › YwqJ-deaminase | 0.57 | 48.0 | 3.96e-01 | 98.7% | 80.0% |
| 5070290 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.55 | 41.0 | 3.55e-01 | 82.7% | 52.0% |
| 4318391 | 2003.1.5.19 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM | 0.53 | 43.0 | 2.79e-01 | 92.0% | 29.5% |
| 5026537 | 2003.1.5.19 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM | 0.53 | 42.0 | 2.76e-01 | 90.7% | 31.2% |
| 4154672 | 2003.1.4.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › SIR2 | 0.51 | 38.0 | 2.60e-01 | 84.0% | 23.3% |
| 5001387 | 330.10.1.1 ↗ | a+b two layers › dsRBD-like › Heterocyclase TruD C-terminal domain › Heterocyclase TruD C-terminal domain › YcaO | 0.50 | 36.0 | 2.70e-01 | 76.0% | 74.8% |