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SRR1747065_scaffold_10_prodigal-single.1__X__X__00203
Bact-VirSRR1747065_scaffold_10_prodigal-single.1__X__X__00203
Identity
- Kingdom:
- phage
Quality
60.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-98
D2
high
residues 136-294
Domain cluster:
rep: NC_028697.1__YP_009191553.1__AU092_gp46__00046__D5-141
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05382.20 best | Amidase_5 | 29.6 | 8.30e-07 | 78.6% | 59.9% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4fdyA02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.81 | 60.0 | 6.55e-01 | 100.0% | 90.3% |
| 1i8nA00 | 3.50.4.10 | Alpha Beta › 3-Layer(bba) Sandwich › Hepatocyte Growth Factor › Hepatocyte Growth Factor | 0.54 | 25.0 | 3.19e-01 | 71.1% | 74.2% |
| 4k7cA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.52 | 46.0 | 3.50e-01 | 98.7% | 91.6% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| None | — | 0.56 | 47.0 | 3.79e-01 | 90.6% | 82.6% | |
| 3974873 | 219.1.1.35 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › SpvD | 0.53 | 48.0 | 4.43e-01 | 100.0% | 98.1% |
| 4611031 | 219.1.1.19 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C54 | 0.53 | 48.0 | 3.84e-01 | 99.4% | 85.4% |
| 4099186 | 219.1.1.21 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C58 | 0.53 | 47.0 | 4.45e-01 | 97.5% | 85.3% |
| 4448672 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.52 | 46.0 | 3.76e-01 | 98.7% | 69.2% |