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SRR1747065_scaffold_10_prodigal-single.1__X__X__00204
Bact-VirSRR1747065_scaffold_10_prodigal-single.1__X__X__00204
Identity
- Kingdom:
- phage
Quality
56.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 166-264
D2
high
residues 273-396
Domain cluster:
rep: MF001361.1__ASZ77376.1__X__00001__D369-485
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00877.26 best | NLPC_P60 | 122.5 | 9.90e-36 | 89.5% | 100.0% |
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3h41A03 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.96 | 91.0 | 9.05e-01 | 100.0% | 96.0% |
| 6biqC01 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.92 | 87.0 | 8.81e-01 | 99.2% | 99.2% |
| 2evrA02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.89 | 86.0 | 8.00e-01 | 100.0% | 87.2% |
| 4fdyA02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.89 | 86.0 | 8.34e-01 | 100.0% | 93.3% |
| 2k1gA00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.88 | 80.0 | 7.93e-01 | 100.0% | 92.2% |
| 3npfA03 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.87 | 84.0 | 7.53e-01 | 100.0% | 81.4% |
| 4xcmA02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.85 | 79.0 | 8.02e-01 | 100.0% | 97.6% |
| 3gt2A00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.85 | 82.0 | 7.94e-01 | 100.0% | 91.9% |
| 3m1uA01 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.81 | 77.0 | 6.77e-01 | 100.0% | 90.6% |
| 2vobB02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.76 | 68.0 | 5.62e-01 | 96.8% | 77.6% |
| 4eq8A00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.75 | 70.0 | 6.45e-01 | 100.0% | 88.6% |
| 4cshA00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.74 | 69.0 | 6.24e-01 | 100.0% | 96.3% |
| 3ntkA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 35.0 | 4.20e-01 | 87.1% | 91.3% |
| 1ybyA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 21.0 | 2.79e-01 | 86.3% | 64.1% |
| 2cudA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.52 | 28.0 | 3.49e-01 | 96.0% | 83.5% |
| 1ex4B02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.50 | 26.0 | 3.43e-01 | 71.0% | 100.0% |
| 2mj0A00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.50 | 27.0 | 3.42e-01 | 100.0% | 95.5% |
| 2eczA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.50 | 27.0 | 3.51e-01 | 81.5% | 94.3% |
ECOD (45)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3287024 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.96 | 84.0 | 8.26e-01 | 100.0% | 85.4% |
| 4078132 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.96 | 91.0 | 9.00e-01 | 100.0% | 94.5% |
| 4373825 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.95 | 86.0 | 8.64e-01 | 100.0% | 92.7% |
| 3076246 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.95 | 83.0 | 8.64e-01 | 100.0% | 96.5% |
| 4476649 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.95 | 91.0 | 8.83e-01 | 100.0% | 91.1% |
| 3979648 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.94 | 92.0 | 8.60e-01 | 100.0% | 86.1% |
| 3517692 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.94 | 86.0 | 8.61e-01 | 100.0% | 92.8% |
| 3971907 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.94 | 90.0 | 8.74e-01 | 100.0% | 91.1% |
| 5063005 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.94 | 85.0 | 8.77e-01 | 100.0% | 98.3% |
| 2410168 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.93 | 89.0 | 8.67e-01 | 100.0% | 91.7% |
| 3960144 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.93 | 55.0 | 7.25e-01 | 73.4% | 100.0% |
| 154189 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.92 | 86.0 | 8.67e-01 | 100.0% | 96.8% |
| 3278116 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.92 | 83.0 | 8.63e-01 | 99.2% | 100.0% |
| 3291157 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.92 | 89.0 | 8.49e-01 | 100.0% | 95.0% |
| 3284393 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.91 | 78.0 | 7.75e-01 | 100.0% | 85.3% |
| 3980140 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.90 | 82.0 | 7.98e-01 | 99.2% | 87.4% |
| 3959495 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.89 | 56.0 | 7.07e-01 | 75.8% | 100.0% |
| 161350 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.89 | 86.0 | 7.98e-01 | 100.0% | 86.6% |
| 4169712 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.89 | 83.0 | 8.35e-01 | 100.0% | 96.0% |
| 3257922 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.88 | 66.0 | 7.59e-01 | 86.3% | 100.0% |
| 4277582 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.88 | 85.0 | 8.22e-01 | 100.0% | 94.1% |
| 3268199 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.88 | 84.0 | 8.05e-01 | 100.0% | 93.6% |
| 1263590 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.88 | 85.0 | 7.61e-01 | 100.0% | 81.9% |
| 3286961 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.87 | 84.0 | 7.89e-01 | 100.0% | 93.1% |
| 182479 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.87 | 84.0 | 6.82e-01 | 100.0% | 61.1% |
| 3963980 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.86 | 82.0 | 7.78e-01 | 100.0% | 93.7% |
| 1489617 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.85 | 79.0 | 7.82e-01 | 100.0% | 92.3% |
| 3838874 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.82 | 78.0 | 6.75e-01 | 100.0% | 86.7% |
| 3981045 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.80 | 76.0 | 6.92e-01 | 100.0% | 98.7% |
| 3385474 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.80 | 76.0 | 6.66e-01 | 100.0% | 86.7% |
| 3964422 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.77 | 73.0 | 6.63e-01 | 100.0% | 89.4% |
| 3606829 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.75 | 68.0 | 5.67e-01 | 96.8% | 79.0% |
| 1905738 | 219.1.1.28 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP | 0.75 | 69.0 | 6.53e-01 | 100.0% | 97.3% |
| 3956333 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.74 | 66.0 | 6.56e-01 | 100.0% | 91.5% |
| 3598532 | 219.1.1.28 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP | 0.74 | 67.0 | 5.59e-01 | 97.6% | 88.8% |
| 3393319 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.60 | 39.0 | 4.16e-01 | 89.5% | 74.5% |
| 4943011 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.60 | 40.0 | 4.46e-01 | 78.2% | 87.4% |
| 4936914 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.58 | 40.0 | 4.26e-01 | 83.9% | 82.9% |
| 3547102 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.58 | 36.0 | 4.17e-01 | 84.7% | 90.6% |
| 3883161 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.57 | 37.0 | 4.20e-01 | 89.5% | 88.9% |
| 4938445 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.56 | 38.0 | 3.69e-01 | 79.0% | 63.0% |
| 3576438 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 35.0 | 4.00e-01 | 91.1% | 87.8% |
| 3368068 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 26.0 | 3.46e-01 | 96.8% | 95.0% |
| 3517651 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 31.0 | 3.95e-01 | 99.2% | 100.0% |
| 3927363 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 23.0 | 3.25e-01 | 96.8% | 98.0% |
D3
medium
residues 17-104