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SRR1747065_scaffold_10_prodigal-single.1__X__X__00232
Bact-VirSRR1747065_scaffold_10_prodigal-single.1__X__X__00232
Identity
- Kingdom:
- phage
Quality
83.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 86-222
Domain cluster:
rep: MZ326863.1__QYW02339.1__CPT_Paku_045__00045__D5-122
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01464.26 best | SLT | 47.6 | 1.60e-12 | 94.9% | 93.2% |
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4c5fA02 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.85 | 81.0 | 7.47e-01 | 100.0% | 98.2% |
| 3bkhA02 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.84 | 79.0 | 7.12e-01 | 100.0% | 98.9% |
| 4hjzA00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.83 | 79.0 | 7.08e-01 | 100.0% | 91.3% |
| 1qsaA03 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.83 | 79.0 | 7.22e-01 | 100.0% | 85.0% |
| 4yibA01 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.83 | 79.0 | 7.49e-01 | 100.0% | 88.6% |
| 4dq5B00 | 1.10.530.50 | Mainly Alpha › Orthogonal Bundle › Lysozyme › Peptidase U40 | 0.80 | 73.0 | 6.92e-01 | 96.4% | 88.7% |
| 153lA00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.80 | 74.0 | 6.61e-01 | 100.0% | 72.4% |
| 6cfcA01 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.80 | 75.0 | 7.02e-01 | 97.8% | 89.4% |
| 2dqaA00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.76 | 64.0 | 6.76e-01 | 95.6% | 99.2% |
| 7k5cB01 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.76 | 69.0 | 6.53e-01 | 95.6% | 83.0% |
| 4qdnA00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.72 | 56.0 | 5.96e-01 | 100.0% | 93.2% |
| 2aplA01 | 1.10.8.330 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › PG0816-like | 0.70 | 35.0 | 4.72e-01 | 73.7% | 95.6% |
| 4yf2A00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.69 | 56.0 | 5.77e-01 | 100.0% | 89.2% |
| 1iizA00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.69 | 54.0 | 5.75e-01 | 100.0% | 94.2% |
| 6ukcA00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.68 | 58.0 | 5.89e-01 | 100.0% | 92.5% |
| 3fi7A01 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.68 | 54.0 | 5.59e-01 | 100.0% | 88.5% |
| 4kt3A00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.67 | 56.0 | 5.54e-01 | 100.0% | 85.8% |
| 1aorA02 | 1.10.569.10 | Mainly Alpha › Orthogonal Bundle › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A; domain 2 › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A, domain 2 | 0.58 | 41.0 | 3.76e-01 | 100.0% | 53.8% |
| 7kypB01 | 1.10.3470.10 | Mainly Alpha › Orthogonal Bundle › ABC transporter involved in vitamin B12 uptake, BtuC › ABC transporter involved in vitamin B12 uptake, BtuC | 0.57 | 35.0 | 2.85e-01 | 92.7% | 30.0% |
| 1zp2A02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.55 | 34.0 | 3.68e-01 | 93.4% | 73.2% |
| 4i6vA01 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.54 | 43.0 | 3.27e-01 | 86.1% | 97.6% |
| 3aqlA02 | 1.10.3090.10 | Mainly Alpha › Orthogonal Bundle › cca-adding enzyme, domain 2 › cca-adding enzyme, domain 2 | 0.53 | 38.0 | 3.13e-01 | 72.3% | 60.9% |
| 1wh4A01 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.52 | 34.0 | 3.98e-01 | 89.8% | 97.9% |
| 2q01A01 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.51 | 42.0 | 3.08e-01 | 89.1% | 97.1% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3964630 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.90 | 72.0 | 6.71e-01 | 100.0% | 68.9% |
| 3985073 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.86 | 75.0 | 7.58e-01 | 99.3% | 91.9% |
| 4515466 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.85 | 81.0 | 7.28e-01 | 100.0% | 92.2% |
| 3947473 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.85 | 74.0 | 7.19e-01 | 97.8% | 83.3% |
| 3166094 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.85 | 81.0 | 7.34e-01 | 100.0% | 94.9% |
| 4530587 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.85 | 80.0 | 7.12e-01 | 99.3% | 89.2% |
| 3970721 | 235.1.1.0 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like | 0.83 | 79.0 | 7.19e-01 | 100.0% | 83.4% |
| 4258903 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.83 | 75.0 | 6.98e-01 | 94.2% | 93.3% |
| 3941811 | 235.1.1.32 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT, PF27553 | 0.83 | 79.0 | 7.26e-01 | 100.0% | 86.5% |
| 3965879 | 235.1.1.32 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT, PF27553 | 0.83 | 79.0 | 7.35e-01 | 100.0% | 85.5% |
| 3971115 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.82 | 79.0 | 7.22e-01 | 100.0% | 90.0% |
| 2393514 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.82 | 78.0 | 6.84e-01 | 100.0% | 87.9% |
| 3838879 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.82 | 77.0 | 7.45e-01 | 100.0% | 90.6% |
| 4431057 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.82 | 76.0 | 7.44e-01 | 100.0% | 91.7% |
| 3317412 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.81 | 77.0 | 6.63e-01 | 100.0% | 85.0% |
| 3944103 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.81 | 76.0 | 6.86e-01 | 100.0% | 85.0% |
| 4205221 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.81 | 77.0 | 7.21e-01 | 100.0% | 97.5% |
| 3884688 | 235.1.1.31 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › PF31087 | 0.79 | 73.0 | 6.69e-01 | 100.0% | 76.6% |
| 3385979 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.78 | 74.0 | 6.52e-01 | 100.0% | 75.3% |
| 3692876 | 235.1.1.0 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like | 0.78 | 74.0 | 6.66e-01 | 100.0% | 80.0% |
| 4009649 | 632.3.1.13 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Phosphoprotein XD domain › Phosphoprotein XD domain › DUF1615 | 0.76 | 69.0 | 6.57e-01 | 100.0% | 83.0% |
| 3720940 | 235.1.1.0 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like | 0.75 | 69.0 | 6.28e-01 | 100.0% | 75.4% |
| 3222819 | 235.1.1.12 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Destabilase | 0.74 | 65.0 | 6.67e-01 | 92.7% | 97.7% |
| 3245104 | 235.1.1.12 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Destabilase | 0.73 | 62.0 | 6.48e-01 | 100.0% | 99.2% |
| 3398878 | 235.1.1.1 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Lys | 0.71 | 54.0 | 5.83e-01 | 100.0% | 92.4% |
| 3396023 | 235.1.1.1 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Lys | 0.68 | 54.0 | 5.78e-01 | 100.0% | 95.0% |
| 4218605 | 235.1.1.1 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Lys | 0.68 | 54.0 | 5.81e-01 | 100.0% | 98.3% |
| 82935 | 235.1.1.1 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Lys | 0.65 | 56.0 | 5.63e-01 | 100.0% | 91.3% |
| 3929290 | 614.1.1.0 ↗ | alpha duplicates or obligate multimers › L27 domain › L27 domain › L27 domain | 0.61 | 32.0 | 4.22e-01 | 75.9% | 97.1% |
| 4456702 | 4953.1.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like | 0.54 | 36.0 | 3.96e-01 | 90.5% | 83.6% |
| 5065586 | 102.1.2.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › DNA-glycosylase | 0.54 | 43.0 | 3.64e-01 | 83.2% | 60.0% |
| 4023679 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.54 | 39.0 | 4.03e-01 | 92.7% | 79.2% |
| 3962973 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.53 | 35.0 | 3.61e-01 | 82.5% | 68.9% |
| 3232960 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.51 | 35.0 | 3.07e-01 | 83.2% | 48.0% |
D2
medium
residues 1-60
Domain cluster:
representative