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SRR1747065_scaffold_124_prodigal-single.1__X__X__00060
Bact-VirSRR1747065_scaffold_124_prodigal-single.1__X__X__00060
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-190
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3n8bA00 | 3.10.450.700 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.70 | 27.0 | 4.31e-01 | 79.1% | 89.3% |
| 1wnhA01 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 28.0 | 3.74e-01 | 79.1% | 81.0% |
| 2cc3A00 | 3.10.450.230 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein | 0.59 | 34.0 | 3.75e-01 | 100.0% | 69.4% |
| 3gp6A00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.54 | 37.0 | 4.02e-01 | 89.0% | 81.3% |
| 2xu8A00 | 3.90.70.190 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Domain of unknown function (DUF5086) | 0.53 | 26.0 | 3.10e-01 | 73.6% | 67.2% |
| 2qiyA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 32.0 | 3.66e-01 | 99.5% | 80.6% |
| 3q90B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 29.0 | 3.41e-01 | 100.0% | 74.6% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3258377 | 331.23.1.0 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain | 0.62 | 26.0 | 3.60e-01 | 73.6% | 77.8% |
| 4202460 | 243.3.1.5 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › FTP | 0.56 | 27.0 | 3.73e-01 | 79.1% | 92.2% |
| 3272765 | 809.1.1.0 ↗ | a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP | 0.56 | 26.0 | 3.59e-01 | 97.3% | 86.3% |
| 3882304 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.55 | 26.0 | 3.30e-01 | 74.2% | 72.7% |
| 3914857 | 3435.1.1.2 ↗ | a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC › CENP-N | 0.54 | 30.0 | 3.57e-01 | 87.9% | 77.6% |
| 3933100 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.54 | 23.0 | 3.42e-01 | 81.9% | 95.7% |
| 3958160 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.54 | 29.0 | 3.49e-01 | 94.5% | 77.5% |
| 3889571 | 243.1.1.2 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 | 0.53 | 30.0 | 3.62e-01 | 100.0% | 81.3% |
| 3761570 | 330.1.1.22 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › PF26536 | 0.53 | 27.0 | 3.33e-01 | 75.8% | 74.8% |