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SRR1747065_scaffold_124_prodigal-single.1__X__X__00073
Bact-VirSRR1747065_scaffold_124_prodigal-single.1__X__X__00073
Identity
- Kingdom:
- phage
Quality
77.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 14-89
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2hi1A00 | 3.40.718.10 | Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase | 0.58 | 44.0 | 2.93e-01 | 82.9% | 72.6% |
| 1nnhA00 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.55 | 45.0 | 3.10e-01 | 93.4% | 88.7% |
| 3g9qA02 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.54 | 42.0 | 3.38e-01 | 84.2% | 76.6% |
| 6ssdA01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.53 | 40.0 | 2.92e-01 | 84.2% | 52.1% |
| 5cg8A00 | 3.60.130.30 | Alpha Beta › 4-Layer Sandwich › Double-stranded beta-helix › | 0.53 | 45.0 | 3.15e-01 | 97.4% | 88.7% |
| 5dxfA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.52 | 42.0 | 3.20e-01 | 93.4% | 61.8% |
| 4o2tA00 | 3.10.50.40 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.52 | 38.0 | 2.97e-01 | 77.6% | 79.8% |
| 1yzyA01 | 3.40.50.10840 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Putative sugar-binding, N-terminal domain | 0.51 | 37.0 | 2.75e-01 | 81.6% | 78.6% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4970256 | 2004.1.1.42 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE | 0.62 | 36.0 | 2.42e-01 | 81.6% | 14.8% |
| 4999472 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.60 | 44.0 | 3.28e-01 | 77.6% | 34.2% |
| 3612614 | 2007.1.2.28 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_A-cyclase_1 | 0.55 | 46.0 | 3.55e-01 | 94.7% | 74.1% |
| 3948250 | 304.124.1.9 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › Phage_tail_terminator_9 | 0.54 | 43.0 | 3.50e-01 | 88.2% | 91.6% |
| 4163051 | 2004.1.1.700 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5587 | 0.53 | 38.0 | 3.22e-01 | 78.9% | 85.7% |
| 3725773 | 4018.1.1.2 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P | 0.52 | 41.0 | 3.24e-01 | 88.2% | 45.9% |
| 4231677 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.52 | 38.0 | 3.11e-01 | 77.6% | 44.1% |
| 1144946 | 284.1.1.10 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › DUF4827 | 0.52 | 38.0 | 2.97e-01 | 77.6% | 79.8% |
| 4959353 | 2498.1.1.58 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › DUF2201_N | 0.51 | 40.0 | 3.17e-01 | 90.8% | 77.8% |
| 4521349 | 7512.1.1.82 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › DUF188 | 0.51 | 38.0 | 3.10e-01 | 80.3% | 87.2% |
| 4034165 | 4018.1.1.2 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P | 0.51 | 42.0 | 3.45e-01 | 90.8% | 58.6% |
| 3737559 | 377.1.1.12 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-C5HC2 | 0.51 | 41.0 | 3.35e-01 | 90.8% | 48.7% |
| 3709419 | 4018.1.1.2 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P | 0.50 | 41.0 | 3.35e-01 | 92.1% | 54.7% |
| 3189468 | 2007.1.4.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain › DAGK_cat | 0.50 | 38.0 | 3.04e-01 | 82.9% | 45.6% |