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SRR1747065_scaffold_28_prodigal-single.1__X__X__00008

Bact-Vir

SRR1747065_scaffold_28_prodigal-single.1__X__X__00008

Identity

Kingdom:
phage

Quality

84.1 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-56
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7ce1A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.52 31.0 3.23e-01 94.4% 59.6%
6e1cA01 1.10.760.10 Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain 0.50 39.0 2.93e-01 92.6% 49.1%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4961744 3236.1.1.16 alpha complex topology › Cation-proton antiporter › Cation-proton antiporter (CPA) › Cation-proton antiporter (CPA) › Asp-Al_Ex 0.52 36.0 2.29e-01 79.6% 52.2%
D2 high residues 76-142
PDB
Domain cluster: representative
CATH (52)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1xc3A01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.85 67.0 5.75e-01 100.0% 55.3%
3cj1A01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.76 68.0 5.15e-01 100.0% 52.6%
3lbfA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.75 41.0 2.82e-01 97.0% 17.4%
3aapA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.72 64.0 5.24e-01 100.0% 59.2%
7alkA01 2.60.40.3510 Mainly Beta › Sandwich › Immunoglobulin-like › 0.72 55.0 4.13e-01 82.1% 70.0%
2uytA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.71 63.0 4.33e-01 100.0% 32.8%
3gveA00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.71 48.0 3.03e-01 70.1% 92.5%
3ll3B01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.71 65.0 4.32e-01 100.0% 30.2%
4c23B01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.71 63.0 4.29e-01 100.0% 31.6%
3h6eB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.70 63.0 5.51e-01 100.0% 70.7%
3a32A01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.68 47.0 2.98e-01 71.6% 33.0%
3u2sC00 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.68 51.0 4.71e-01 83.6% 88.9%
2p0wA02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.66 52.0 4.12e-01 83.6% 63.9%
3otlA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.64 40.0 3.07e-01 70.1% 27.5%
2w40A01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.64 55.0 3.75e-01 100.0% 31.1%
7vd7A01 3.10.450.530 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 0.63 43.0 3.85e-01 100.0% 51.1%
1f21A00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.62 54.0 4.20e-01 100.0% 44.1%
5dynA01 3.40.50.11970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.60 51.0 4.46e-01 100.0% 62.3%
8f5pE01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 44.0 2.78e-01 80.6% 19.2%
3mazA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.60 53.0 4.65e-01 100.0% 75.8%
5is8A02 2.70.160.11 Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 0.60 46.0 3.36e-01 86.6% 79.9%
4d10F01 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.59 43.0 3.25e-01 80.6% 44.1%
1vbfA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 37.0 2.60e-01 100.0% 19.6%
8adlB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 45.0 2.91e-01 85.1% 17.6%
3bgtA01 2.40.400.10 Mainly Beta › Beta Barrel › Acetoacetate decarboxylase-like › Acetoacetate decarboxylase-like 0.56 47.0 3.40e-01 100.0% 74.5%
7r8iA01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.56 45.0 3.19e-01 89.6% 29.0%
2je2A00 3.50.70.20 Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › Cytochrome P460 0.56 50.0 3.82e-01 100.0% 72.0%
1z5hA01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.56 48.0 3.67e-01 100.0% 71.8%
3qnfC01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.56 47.0 3.45e-01 100.0% 70.2%
6ea2A01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.55 46.0 3.49e-01 100.0% 71.1%
4hsqA01 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 48.0 3.78e-01 100.0% 97.2%
3ni8A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 40.0 3.21e-01 80.6% 100.0%
2vf9A00 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.54 43.0 3.54e-01 89.6% 80.2%
6m9yA00 3.30.1300.40 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 0.54 38.0 4.05e-01 97.0% 87.7%
1of5A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 45.0 3.45e-01 94.0% 41.6%
3klxB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.53 42.0 3.19e-01 89.6% 92.3%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.53 35.0 3.56e-01 88.1% 68.1%
2wkcB00 2.40.50.400 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Lactococcus phage single-stranded DNA binding protein 0.53 40.0 3.69e-01 83.6% 91.0%
1vdxA00 3.90.1140.10 Alpha Beta › Alpha-Beta Complex › Cyclic Phosphodiesterase; Chain: A, › Cyclic phosphodiesterase 0.53 41.0 3.13e-01 91.0% 42.9%
4ydzA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 43.0 3.53e-01 95.5% 88.1%
4l2iB00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.52 44.0 3.04e-01 100.0% 44.1%
2lruA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.52 42.0 3.85e-01 97.0% 79.6%
2pcsA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 39.0 3.09e-01 83.6% 98.7%
3wodG00 2.30.30.1250 Mainly Beta › Roll › SH3 type barrels. › 0.52 42.0 3.50e-01 94.0% 63.8%
3qt2A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 44.0 3.98e-01 98.5% 89.7%
1lcsA00 3.90.310.10 Alpha Beta › Alpha-Beta Complex › Viral Glycoprotein Gp70 › ENV polyprotein, receptor-binding domain 0.51 42.0 3.13e-01 98.5% 91.2%
1y8cA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.51 31.0 3.26e-01 70.1% 66.7%
4gnxC03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 40.0 3.08e-01 92.5% 53.6%
2wiqA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.51 45.0 3.13e-01 100.0% 47.6%
8aasC01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 37.0 3.28e-01 79.1% 76.5%
3nwsA01 2.40.50.800 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.51 42.0 3.43e-01 98.5% 49.6%
4iykA02 2.60.40.2060 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 42.0 3.62e-01 98.5% 97.5%
ECOD (85)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4974213 2484.1.1.77 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Terminase_6C 0.83 76.0 5.36e-01 100.0% 38.5%
2845074 2484.1.1.29 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ppx-GppA 0.80 74.0 5.80e-01 100.0% 62.3%
4010072 2484.1.1.86 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › TerL_nuclease 0.78 69.0 4.73e-01 100.0% 42.1%
3616473 2484.1.1.99 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Peptidase_A17 0.78 70.0 4.98e-01 100.0% 42.6%
3507631 11.2.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PI3K_C2 0.77 60.0 4.34e-01 82.1% 70.3%
4158783 2484.1.1.29 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ppx-GppA 0.77 70.0 5.51e-01 100.0% 60.0%
3196234 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.77 68.0 4.99e-01 100.0% 44.4%
4002282 2484.1.1.15 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › GDA1_CD39 0.77 69.0 4.93e-01 100.0% 43.7%
3539279 2484.1.1.15 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › GDA1_CD39 0.76 69.0 4.78e-01 100.0% 38.1%
4004191 2484.1.1.99 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Peptidase_A17 0.76 68.0 4.80e-01 100.0% 40.0%
3696317 2484.1.1.15 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › GDA1_CD39 0.75 67.0 5.00e-01 100.0% 49.4%
3524803 2484.1.1.15 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › GDA1_CD39 0.75 68.0 5.20e-01 100.0% 54.7%
4408649 2484.1.1.41 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › AnmK 0.74 66.0 4.58e-01 100.0% 42.7%
1687158 2484.1.1.41 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › AnmK 0.74 66.0 4.90e-01 100.0% 59.2%
3734190 2484.1.1.220 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27033 0.74 65.0 4.43e-01 100.0% 71.4%
3781216 2484.1.1.212 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RT_RNaseH 0.73 65.0 5.10e-01 100.0% 55.0%
4255284 2484.1.1.41 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › AnmK 0.72 65.0 4.48e-01 100.0% 43.6%
1187234 2484.1.1.15 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › GDA1_CD39 0.72 64.0 5.03e-01 100.0% 51.7%
3937613 2484.5.1.2 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH 0.72 64.0 5.12e-01 100.0% 57.0%
3934415 2484.5.1.2 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH 0.72 64.0 5.11e-01 100.0% 58.5%
4002839 2484.1.1.1 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.72 65.0 4.49e-01 100.0% 69.8%
4126573 2484.1.1.41 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › AnmK 0.72 65.0 4.52e-01 100.0% 46.7%
3783184 2484.1.1.212 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RT_RNaseH 0.72 64.0 5.05e-01 100.0% 54.3%
4634661 2484.1.1.41 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › AnmK 0.72 64.0 3.97e-01 100.0% 24.8%
4124613 2484.1.1.175 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FGGY_N+FGGY_C 0.72 64.0 3.82e-01 100.0% 16.7%
4371680 2484.1.1.41 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › AnmK 0.71 64.0 4.53e-01 100.0% 45.6%
3929756 2484.5.1.2 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH 0.71 64.0 5.79e-01 100.0% 85.6%
4111183 2484.1.1.206 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70, FGGY_C 0.71 64.0 4.49e-01 100.0% 74.6%
4886046 511.1.1.1 beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › HSP70 0.71 64.0 4.47e-01 100.0% 72.9%
5011661 2484.1.1.59 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA 0.71 61.0 4.50e-01 100.0% 87.4%
3483602 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.70 54.0 4.23e-01 82.1% 74.3%
3618372 2484.1.1.99 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Peptidase_A17 0.70 62.0 5.14e-01 100.0% 67.5%
3940409 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.70 62.0 3.72e-01 100.0% 15.6%
4000117 5.1.4.224 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_RFWD3 0.70 57.0 3.58e-01 88.1% 25.0%
3636281 2484.1.1.10 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › TsaD 0.69 60.0 4.35e-01 100.0% 56.4%
3223921 2484.1.1.259 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF26742 0.69 61.0 5.56e-01 100.0% 85.6%
4457744 2484.1.1.59 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA 0.69 59.0 3.88e-01 100.0% 80.0%
3561019 2484.5.1.3 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH_2 0.68 60.0 4.87e-01 100.0% 59.2%
3741960 5.1.4.242 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PEP5_VPS11_N 0.68 55.0 3.48e-01 88.1% 24.2%
3935314 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.68 60.0 3.68e-01 100.0% 19.3%
3924083 2484.1.1.204 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27046, PF27073 0.68 60.0 4.46e-01 100.0% 42.9%
3689161 2484.1.1.1 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.68 58.0 4.29e-01 100.0% 93.2%
4612956 2484.1.1.50 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Dimer_Tnp_hAT 0.67 59.0 3.72e-01 100.0% 26.6%
3582595 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.67 54.0 3.68e-01 88.1% 32.3%
3780866 2484.1.1.204 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27046, PF27073 0.67 59.0 3.52e-01 100.0% 14.6%
3938634 2484.1.1.50 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Dimer_Tnp_hAT 0.67 57.0 3.52e-01 100.0% 17.5%
5030672 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.66 57.0 3.87e-01 100.0% 88.7%
3324457 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.66 52.0 3.14e-01 86.6% 25.8%
3939338 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.66 57.0 4.16e-01 100.0% 40.5%
3531250 2484.1.1.50 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Dimer_Tnp_hAT 0.66 59.0 3.59e-01 100.0% 34.6%
3517477 2484.1.1.230 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27073 0.66 57.0 4.99e-01 100.0% 69.5%
3504143 2484.1.1.230 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27073 0.66 57.0 4.40e-01 100.0% 45.6%
3779981 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.66 59.0 3.60e-01 100.0% 34.9%
3919374 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.66 53.0 4.30e-01 88.1% 67.2%
3834102 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.65 52.0 3.18e-01 88.1% 14.0%
3932764 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.65 56.0 4.45e-01 100.0% 87.6%
3214480 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.65 56.0 3.38e-01 100.0% 19.2%
4336711 2484.1.1.41 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › AnmK 0.64 56.0 3.92e-01 100.0% 43.0%
3923858 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.63 54.0 4.40e-01 95.5% 96.0%
3599435 5.1.4.16 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A 0.62 50.0 3.12e-01 88.1% 20.5%
3214642 2484.1.1.50 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Dimer_Tnp_hAT 0.62 54.0 3.33e-01 100.0% 17.4%
3429744 3347.1.1.2 beta meanders › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › DUF1005 0.62 55.0 4.08e-01 100.0% 66.9%
4383357 2484.1.1.67 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.62 54.0 4.33e-01 100.0% 53.6%
None 0.62 53.0 3.34e-01 100.0% 46.2%
3722420 2008.1.1.143 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF7924 0.62 51.0 3.90e-01 92.5% 43.8%
3508989 2484.1.1.230 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27073 0.62 53.0 4.12e-01 100.0% 66.5%
3628522 5.1.4.489 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Prenyltrans 0.61 55.0 3.09e-01 100.0% 43.2%
3743348 11.1.1.470 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Psg1 0.60 41.0 3.50e-01 70.1% 63.6%
4943785 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 41.0 3.26e-01 94.0% 34.3%
3712993 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.60 46.0 4.49e-01 85.1% 76.0%
3606828 241.15.1.0 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain 0.59 47.0 3.86e-01 89.6% 53.8%
3590547 2484.1.1.67 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.59 50.0 4.13e-01 100.0% 54.6%
5014316 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.58 46.0 3.55e-01 89.6% 50.6%
3700177 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 38.0 3.39e-01 70.1% 81.9%
4309543 2484.1.1.4 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H 0.57 49.0 3.96e-01 100.0% 85.0%
5011027 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.57 45.0 3.44e-01 91.0% 44.0%
4960448 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.54 42.0 3.80e-01 89.6% 82.0%
3497315 11.1.1.179 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.54 47.0 3.92e-01 98.5% 88.3%
3496968 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 47.0 3.87e-01 98.5% 85.6%
3626832 883.1.1.15 a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP+LBP_BPI_CETP_C 0.54 46.0 2.81e-01 94.0% 27.3%
5048918 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 43.0 3.51e-01 91.0% 52.3%
4946153 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.52 40.0 3.28e-01 91.0% 69.7%
3928114 2484.1.1.1 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.52 42.0 2.67e-01 100.0% 38.6%
3998374 883.1.1.1 a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP 0.51 44.0 3.11e-01 94.0% 63.5%
3933213 11.1.1.447 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › NDNF_C 0.51 43.0 3.51e-01 97.0% 80.0%