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SRR1747065_scaffold_28_prodigal-single.1__X__X__00024
Bact-VirSRR1747065_scaffold_28_prodigal-single.1__X__X__00024
Identity
- Kingdom:
- phage
Quality
63.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 46-146
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1auyB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.63 | 47.0 | 3.85e-01 | 79.2% | 86.2% |
| 2f4pA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.59 | 40.0 | 3.67e-01 | 70.3% | 61.9% |
| 5by5A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.58 | 42.0 | 4.06e-01 | 75.2% | 71.3% |
| 5cu1A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.56 | 38.0 | 3.07e-01 | 70.3% | 61.9% |
| 1pmiA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.56 | 40.0 | 3.27e-01 | 74.3% | 55.7% |
| 2pfwA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.55 | 40.0 | 3.93e-01 | 75.2% | 73.9% |
| 3fjsC00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.55 | 41.0 | 4.09e-01 | 78.2% | 76.6% |
| 4ei0A01 | 2.60.40.3550 | Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4466 | 0.54 | 43.0 | 3.88e-01 | 87.1% | 87.9% |
| 3s7iB01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 40.0 | 3.27e-01 | 80.2% | 68.1% |
| 1uf2C02 | 2.60.120.170 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 39.0 | 3.41e-01 | 78.2% | 100.0% |
| 2pn5A08 | 2.60.120.1540 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 38.0 | 3.71e-01 | 76.2% | 99.1% |
| 3wqbA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 38.0 | 3.26e-01 | 76.2% | 100.0% |
| 3zpeA00 | 2.60.90.50 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › | 0.52 | 38.0 | 3.52e-01 | 79.2% | 84.8% |
| 3m70A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 38.0 | 3.75e-01 | 77.2% | 94.3% |
| 2vm9A01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 36.0 | 3.19e-01 | 73.3% | 100.0% |
| 3bvxA05 | 2.60.40.1360 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 35.0 | 3.60e-01 | 70.3% | 79.2% |
| 6v55A01 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.51 | 35.0 | 3.41e-01 | 71.3% | 67.0% |
| 1sidF00 | 2.60.175.10 | Mainly Beta › Sandwich › Polyomavirus Vp1; Chain A › Capsid protein VP1,Polyomavirus | 0.51 | 36.0 | 2.57e-01 | 76.2% | 76.8% |
| 1o59A01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.50 | 36.0 | 3.05e-01 | 75.2% | 89.8% |
| 2yuxA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 35.0 | 3.52e-01 | 74.3% | 76.9% |
| 4d0qA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.50 | 36.0 | 3.14e-01 | 76.2% | 78.9% |
| 4n2kA01 | 2.60.40.1860 | Mainly Beta › Sandwich › Immunoglobulin-like › Protein-arginine deiminase, N-terminal domain | 0.50 | 38.0 | 3.66e-01 | 82.2% | 84.9% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3974326 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.62 | 43.0 | 4.04e-01 | 72.3% | 67.2% |
| 4971703 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.62 | 41.0 | 4.44e-01 | 74.3% | 80.0% |
| 3291549 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.61 | 44.0 | 4.37e-01 | 74.3% | 99.0% |
| 3811908 | 4111.1.1.2 ↗ | a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › PCC | 0.61 | 41.0 | 3.72e-01 | 70.3% | 87.1% |
| 1490128 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.60 | 42.0 | 3.81e-01 | 71.3% | 63.4% |
| 3401979 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.60 | 51.0 | 4.01e-01 | 94.1% | 76.8% |
| 4028658 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.60 | 41.0 | 3.59e-01 | 70.3% | 60.7% |
| 3219491 | 10.4.1.9 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB_2 | 0.58 | 37.0 | 3.61e-01 | 70.3% | 57.4% |
| 5067959 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.57 | 42.0 | 4.07e-01 | 78.2% | 80.9% |
| 4052150 | 10.12.1.33 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Ectoine_synth | 0.55 | 40.0 | 3.70e-01 | 73.3% | 65.6% |
| 3908804 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 42.0 | 4.18e-01 | 82.2% | 95.2% |
| 3893165 | 10.4.1.23 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CDCP1_CUB_6 | 0.54 | 38.0 | 3.64e-01 | 71.3% | 69.6% |
| 3213559 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.54 | 37.0 | 3.69e-01 | 71.3% | 67.6% |
| 3498171 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 42.0 | 3.42e-01 | 84.2% | 75.5% |
| 3742118 | 11.1.1.161 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TPPII | 0.54 | 42.0 | 3.99e-01 | 83.2% | 80.0% |
| 3879285 | 10.4.1.23 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CDCP1_CUB_6 | 0.54 | 38.0 | 3.63e-01 | 73.3% | 63.3% |
| 3404684 | 10.12.1.84 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › VKGC_lumenal_dom | 0.54 | 40.0 | 3.16e-01 | 78.2% | 41.0% |
| 3571451 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.54 | 37.0 | 3.53e-01 | 71.3% | 65.8% |
| 3891591 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.54 | 39.0 | 3.67e-01 | 75.2% | 65.0% |
| 3757196 | 10.12.1.21 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › ERG2_Sigma1R | 0.52 | 41.0 | 3.22e-01 | 84.2% | 89.3% |
| 3925544 | 11.1.1.848 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7585 | 0.52 | 33.0 | 3.56e-01 | 76.2% | 76.5% |
| 4296109 | 10.2.1.39 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Cu2_monoox_C | 0.51 | 41.0 | 3.21e-01 | 89.1% | 78.8% |
| 3585395 | 10.12.1.62 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › PMI_typeI_cat | 0.51 | 35.0 | 3.14e-01 | 71.3% | 89.7% |
| 4990061 | 12.1.1.118 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Hydantoinase_B | 0.51 | 37.0 | 3.62e-01 | 76.2% | 74.5% |
| 1261 | 10.5.1.6 ↗ | beta sandwiches › jelly-roll › Viral protein domain › Viral protein domain › Phytoreo_P8 | 0.51 | 37.0 | 3.28e-01 | 77.2% | 100.0% |
| 5009738 | 1144.1.1.1 ↗ | beta sandwiches › Apc (acetophenone carboxylase) beta subunit C-terminal domain › Apc (acetophenone carboxylase) beta subunit C-terminal domain › Apc (acetophenone carboxylase) beta subunit C-terminal domain › Hydantoinase_B | 0.51 | 44.0 | 3.47e-01 | 96.0% | 83.6% |
| 3884573 | 11.1.1.318 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › IL3Rb_N | 0.51 | 32.0 | 3.33e-01 | 77.2% | 68.9% |
| 4452107 | 1144.1.1.1 ↗ | beta sandwiches › Apc (acetophenone carboxylase) beta subunit C-terminal domain › Apc (acetophenone carboxylase) beta subunit C-terminal domain › Apc (acetophenone carboxylase) beta subunit C-terminal domain › Hydantoinase_B | 0.50 | 43.0 | 3.43e-01 | 96.0% | 96.3% |
| 4130134 | 3468.1.1.1 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN | 0.50 | 40.0 | 3.60e-01 | 86.1% | 100.0% |
| 3400205 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.50 | 36.0 | 3.25e-01 | 76.2% | 71.7% |