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SRR1747065_scaffold_28_prodigal-single.1__X__X__00082

Bact-Vir

SRR1747065_scaffold_28_prodigal-single.1__X__X__00082

Identity

Kingdom:
phage

Quality

86.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-88
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ijmA00 3.90.1570.20 Alpha Beta › Alpha-Beta Complex › tt1808, chain A › 0.66 56.0 4.70e-01 100.0% 54.1%
2bmxB01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.50 35.0 2.87e-01 73.8% 59.9%
ECOD (12)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4608919 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.85 77.0 5.37e-01 100.0% 33.8%
3274249 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.76 53.0 3.86e-01 72.6% 29.3%
3949824 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.73 67.0 4.88e-01 100.0% 43.2%
4402765 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.71 42.0 3.58e-01 91.7% 38.0%
3193527 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.69 49.0 3.66e-01 73.8% 38.0%
5010735 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.66 46.0 3.85e-01 91.7% 42.1%
4998161 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.62 41.0 3.37e-01 91.7% 37.4%
5077968 3636.1.1.0 ↗ a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain 0.54 37.0 3.34e-01 86.9% 49.6%
5053558 3636.1.1.0 ↗ a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain 0.53 40.0 3.44e-01 96.4% 50.0%
4494448 2008.1.1.183 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF27227 0.51 37.0 3.23e-01 77.4% 49.6%
4888232 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.51 38.0 3.12e-01 81.0% 84.3%
4964370 2008.1.1.230 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF7527 0.50 37.0 2.83e-01 82.1% 69.4%