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SRR1747065_scaffold_28_prodigal-single.1__X__X__00128
Bact-VirSRR1747065_scaffold_28_prodigal-single.1__X__X__00128
Identity
- Kingdom:
- phage
Quality
90.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 209-372
Domain cluster:
rep: KY629563.1__ARK07422.1__LAV_00022__00022__D6-135
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3h41A03 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.82 | 58.0 | 6.67e-01 | 100.0% | 94.4% |
| 6biqC01 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.82 | 58.0 | 6.78e-01 | 100.0% | 98.3% |
| 4xcmA02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.74 | 52.0 | 6.02e-01 | 100.0% | 95.9% |
| 3i35A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.60 | 17.0 | 3.05e-01 | 91.5% | 75.4% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3287024 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.86 | 57.0 | 6.39e-01 | 100.0% | 83.8% |
| 3076246 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.86 | 56.0 | 6.73e-01 | 100.0% | 94.8% |
| 3517692 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.85 | 58.0 | 6.70e-01 | 100.0% | 91.2% |
| 3284393 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.83 | 54.0 | 6.13e-01 | 100.0% | 83.7% |
| 3278116 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.82 | 56.0 | 6.70e-01 | 99.4% | 98.3% |
| 4078132 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.82 | 58.0 | 6.61e-01 | 100.0% | 93.0% |
| 2410168 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.82 | 58.0 | 6.50e-01 | 100.0% | 90.2% |
| 3979648 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.81 | 59.0 | 6.36e-01 | 100.0% | 84.7% |
| 182479 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.80 | 60.0 | 5.46e-01 | 100.0% | 60.1% |
| 3286961 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.80 | 63.0 | 6.70e-01 | 100.0% | 91.7% |
| 4169712 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.79 | 55.0 | 6.35e-01 | 100.0% | 94.4% |
| 3268199 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.77 | 59.0 | 6.35e-01 | 100.0% | 92.1% |
| 3257922 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.76 | 44.0 | 5.72e-01 | 90.2% | 98.9% |
| 1489617 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.74 | 52.0 | 5.87e-01 | 100.0% | 90.8% |
| 3956333 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.73 | 51.0 | 5.68e-01 | 100.0% | 89.2% |
| 3282002 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.62 | 56.0 | 4.90e-01 | 100.0% | 66.8% |
| 4049734 | 1.16.1.5 ↗ | beta barrels › cradle loop barrel › Baseplate wedge protein gp6 domain I › Baseplate wedge protein gp6 domain I › Baseplate_J | 0.55 | 21.0 | 3.10e-01 | 93.3% | 76.0% |
D2
high
residues 404-468
Domain cluster:
rep: MW388005.1__QQO39020.1__X__00046__D8-66
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01471.24 best | PG_binding_1 | 58.4 | 9.20e-16 | 90.8% | 98.2% |
D3
high
residues 486-552
Domain cluster:
rep: MK448998.1__QBX31359.1__Javan636_0004__00059__D112-179
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08239.18 best | SH3_3 | 29.0 | 1.30e-06 | 89.5% | 96.3% |
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2krsA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.91 | 76.0 | 7.98e-01 | 100.0% | 98.3% |
| 3npfA02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.91 | 76.0 | 7.48e-01 | 100.0% | 84.3% |
| 3npfB01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.88 | 72.0 | 7.31e-01 | 100.0% | 87.9% |
| 6bioA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.86 | 67.0 | 7.25e-01 | 95.5% | 96.5% |
| 8b2gA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.85 | 72.0 | 7.70e-01 | 94.0% | 100.0% |
| 4krtB03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.83 | 75.0 | 7.54e-01 | 100.0% | 95.5% |
| 3h41A02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.80 | 65.0 | 6.55e-01 | 100.0% | 85.3% |
| 4iimA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.80 | 58.0 | 6.23e-01 | 100.0% | 89.5% |
| 1ov3A02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.78 | 58.0 | 6.27e-01 | 100.0% | 94.5% |
| 2pqhB00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.77 | 57.0 | 5.81e-01 | 100.0% | 80.0% |
| 2epdA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.76 | 56.0 | 5.37e-01 | 100.0% | 68.4% |
| 2ekhA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.76 | 55.0 | 5.24e-01 | 100.0% | 65.0% |
| 2dmoA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.75 | 55.0 | 5.53e-01 | 100.0% | 76.5% |
| 5o99A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.75 | 54.0 | 5.70e-01 | 100.0% | 86.7% |
| 4z88A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.74 | 62.0 | 6.35e-01 | 100.0% | 93.8% |
| 1gcqB00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.73 | 53.0 | 5.74e-01 | 100.0% | 91.2% |
| 6ghmC02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.72 | 55.0 | 5.68e-01 | 100.0% | 85.9% |
| 1x43A01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.72 | 54.0 | 5.57e-01 | 100.0% | 87.1% |
| 2vgeA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.71 | 54.0 | 3.81e-01 | 100.0% | 26.6% |
| 2egeA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.69 | 57.0 | 5.49e-01 | 100.0% | 80.0% |
| 4amwA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.58 | 38.0 | 3.80e-01 | 95.5% | 64.8% |
| 2cs7A00 | 3.10.50.90 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.58 | 41.0 | 4.36e-01 | 92.5% | 90.9% |
| 1dj7B00 | 2.30.30.50 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 47.0 | 4.64e-01 | 100.0% | 90.4% |
| 7oc3A01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 40.0 | 3.69e-01 | 100.0% | 60.9% |
| 1wapA00 | 2.60.40.50 | Mainly Beta › Sandwich › Immunoglobulin-like › TRAP-like | 0.53 | 41.0 | 4.12e-01 | 100.0% | 82.4% |
| 2coaA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 45.0 | 3.85e-01 | 98.5% | 91.5% |
| 6j19A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 40.0 | 2.82e-01 | 89.6% | 95.0% |
| 2jpeA00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.52 | 41.0 | 3.40e-01 | 91.0% | 80.3% |
| 1tj6A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 44.0 | 3.78e-01 | 100.0% | 87.8% |
| 2codA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 43.0 | 3.91e-01 | 98.5% | 88.5% |
| 3au4A04 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 43.0 | 3.93e-01 | 98.5% | 80.6% |
| 1v5uA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 42.0 | 3.59e-01 | 97.0% | 82.1% |
| 4iapA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 41.0 | 3.82e-01 | 97.0% | 93.5% |
| 4hhvA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.50 | 41.0 | 3.72e-01 | 98.5% | 87.4% |
ECOD (58)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4550532 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.95 | 81.0 | 7.19e-01 | 100.0% | 66.7% |
| 3840076 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.94 | 79.0 | 8.37e-01 | 100.0% | 98.3% |
| 4196229 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.93 | 78.0 | 7.73e-01 | 100.0% | 84.3% |
| 4520767 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.92 | 77.0 | 7.64e-01 | 100.0% | 84.3% |
| 4602101 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.91 | 76.0 | 7.71e-01 | 100.0% | 89.2% |
| 137916 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.91 | 76.0 | 7.71e-01 | 100.0% | 90.8% |
| 1263586 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.91 | 76.0 | 7.41e-01 | 100.0% | 81.9% |
| 1263580 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.91 | 76.0 | 7.28e-01 | 100.0% | 78.7% |
| 137947 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.90 | 76.0 | 7.68e-01 | 100.0% | 89.6% |
| 4446467 | 4.1.1.278 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_YKFC_2nd | 0.90 | 71.0 | 7.20e-01 | 100.0% | 84.6% |
| 4127826 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.90 | 76.0 | 7.77e-01 | 100.0% | 92.3% |
| 4537356 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.89 | 74.0 | 7.86e-01 | 98.5% | 98.3% |
| 4031670 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.88 | 74.0 | 7.83e-01 | 100.0% | 98.3% |
| 4038705 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.88 | 74.0 | 7.59e-01 | 100.0% | 92.3% |
| 1673571 | 4.1.1.120 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_16 | 0.87 | 72.0 | 6.86e-01 | 100.0% | 76.3% |
| 4358722 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.87 | 73.0 | 6.13e-01 | 100.0% | 56.2% |
| 2410170 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.87 | 71.0 | 7.36e-01 | 100.0% | 92.1% |
| 4207556 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.86 | 79.0 | 7.81e-01 | 100.0% | 92.9% |
| 3165077 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.86 | 72.0 | 7.12e-01 | 100.0% | 85.7% |
| 4009391 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.85 | 73.0 | 6.82e-01 | 98.5% | 76.2% |
| 4013287 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.85 | 73.0 | 7.76e-01 | 95.5% | 100.0% |
| 3204891 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.85 | 81.0 | 7.72e-01 | 100.0% | 94.7% |
| 4650162 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.85 | 68.0 | 6.98e-01 | 100.0% | 89.2% |
| 4291404 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.84 | 74.0 | 7.10e-01 | 100.0% | 84.0% |
| 1290375 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.84 | 75.0 | 7.52e-01 | 100.0% | 94.1% |
| 3988893 | 4.1.1.59 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_5 | 0.84 | 69.0 | 6.66e-01 | 95.5% | 78.7% |
| 4084890 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.83 | 74.0 | 7.50e-01 | 98.5% | 96.9% |
| 3838574 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.83 | 64.0 | 7.05e-01 | 95.5% | 100.0% |
| 4032300 | 4.1.1.59 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_5 | 0.83 | 77.0 | 6.90e-01 | 100.0% | 83.3% |
| 3289848 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.81 | 77.0 | 7.41e-01 | 100.0% | 96.0% |
| 4588126 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.81 | 76.0 | 6.76e-01 | 98.5% | 86.5% |
| 3978088 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.80 | 64.0 | 6.55e-01 | 100.0% | 87.7% |
| 4340107 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.80 | 74.0 | 7.14e-01 | 100.0% | 92.0% |
| 4091791 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.80 | 70.0 | 6.69e-01 | 98.5% | 82.7% |
| 1905739 | 4.1.1.59 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_5 | 0.79 | 74.0 | 6.71e-01 | 100.0% | 87.2% |
| 3263489 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.79 | 59.0 | 6.04e-01 | 100.0% | 81.5% |
| 3700747 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.79 | 74.0 | 6.56e-01 | 100.0% | 84.4% |
| 5063003 | 4.1.1.120 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_16 | 0.78 | 72.0 | 7.12e-01 | 100.0% | 94.3% |
| 3923675 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.78 | 60.0 | 6.11e-01 | 100.0% | 84.6% |
| 3278325 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.78 | 65.0 | 6.88e-01 | 98.5% | 100.0% |
| 3715828 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.78 | 71.0 | 6.67e-01 | 100.0% | 87.5% |
| 3539094 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 63.0 | 5.89e-01 | 100.0% | 76.2% |
| 3883895 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.73 | 62.0 | 5.37e-01 | 100.0% | 61.0% |
| 3483375 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 61.0 | 5.90e-01 | 100.0% | 81.3% |
| 3523030 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.72 | 59.0 | 6.00e-01 | 100.0% | 90.8% |
| 3594081 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 65.0 | 6.11e-01 | 100.0% | 88.7% |
| 4385345 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.71 | 43.0 | 4.79e-01 | 100.0% | 80.0% |
| 3763060 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.71 | 58.0 | 5.78e-01 | 100.0% | 85.7% |
| 3839839 | 4.1.1.84 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_7 | 0.70 | 64.0 | 5.79e-01 | 100.0% | 80.0% |
| 3338134 | 4.1.1.155 ↗ | beta barrels › SH3 › SH3 › SH3 › CRR42-like | 0.69 | 57.0 | 5.56e-01 | 100.0% | 81.3% |
| 3585452 | 4.1.1.334 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1, SH3_2 | 0.68 | 57.0 | 5.65e-01 | 100.0% | 87.1% |
| 3908789 | 4.1.1.354 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY, PF28930 | 0.61 | 54.0 | 3.54e-01 | 100.0% | 23.2% |
| 1503651 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.58 | 41.0 | 3.90e-01 | 100.0% | 62.5% |
| 3620552 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.58 | 39.0 | 4.35e-01 | 100.0% | 96.0% |
| 4973635 | 4.6.1.2 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC | 0.56 | 39.0 | 3.00e-01 | 100.0% | 30.6% |
| 4037377 | 1.1.8.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › Beta-barrel_CAF17_C | 0.51 | 41.0 | 3.57e-01 | 94.0% | 89.6% |
| 4013052 | 376.1.6.9 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › PF26200 | 0.51 | 28.0 | 2.89e-01 | 73.1% | 50.8% |
| 3434219 | 4.25.1.2 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain › BRWD_AD | 0.51 | 39.0 | 3.57e-01 | 100.0% | 61.1% |
D4
medium
residues 1-27_43-54_158-187
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2nw0A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.96 | 92.0 | 6.37e-01 | 100.0% | 92.1% |
| 4ff5A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.94 | 89.0 | 5.96e-01 | 100.0% | 86.3% |
| 4jz5A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.92 | 86.0 | 5.92e-01 | 100.0% | 92.2% |
| 1jfxA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.91 | 85.0 | 5.78e-01 | 100.0% | 91.2% |
| 4kruA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.91 | 85.0 | 5.78e-01 | 100.0% | 87.9% |
| 5jipA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.88 | 81.0 | 5.47e-01 | 100.0% | 92.1% |
| 2ww5A02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.88 | 81.0 | 5.65e-01 | 100.0% | 98.5% |
| 2wagA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.84 | 77.0 | 5.32e-01 | 100.0% | 88.0% |
| 5a6sA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.83 | 75.0 | 5.35e-01 | 100.0% | 92.8% |
| 3alfA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.62 | 52.0 | 3.52e-01 | 95.7% | 96.4% |
| 1wduB00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.59 | 51.0 | 3.60e-01 | 98.6% | 97.3% |
| 1euhA02 | 3.40.309.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 2 › Aldehyde Dehydrogenase; Chain A, domain 2 | 0.56 | 46.0 | 3.37e-01 | 92.8% | 93.8% |
| 2gl5A02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.54 | 46.0 | 3.16e-01 | 98.6% | 91.4% |
| 3qfmA00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.52 | 44.0 | 3.06e-01 | 98.6% | 79.1% |
| 3tghA00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.52 | 41.0 | 2.81e-01 | 92.8% | 87.0% |
| 3eh0A01 | 3.40.1390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Udp-n-acetylmuramoylalanyl-d-glutamate--2,6- Diaminopimelate Ligase; Chain: A, domain 1 › MurE/MurF, N-terminal domain | 0.50 | 37.0 | 3.36e-01 | 100.0% | 56.6% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 139515 | 2002.1.1.55 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_25 | 0.96 | 92.0 | 6.39e-01 | 100.0% | 92.6% |
| 1066802 | 2002.1.1.55 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_25 | 0.94 | 89.0 | 5.96e-01 | 100.0% | 86.3% |
| 4009663 | 2002.1.1.55 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_25 | 0.92 | 87.0 | 5.77e-01 | 100.0% | 80.0% |
| 1284139 | 2002.1.1.55 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_25 | 0.92 | 86.0 | 5.95e-01 | 100.0% | 94.1% |
| 1290373 | 2002.1.1.55 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_25 | 0.91 | 85.0 | 5.85e-01 | 100.0% | 90.4% |
| 5064016 | 2002.1.1.55 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_25 | 0.90 | 84.0 | 5.85e-01 | 100.0% | 94.0% |
| 3283842 | 2002.1.1.55 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_25 | 0.90 | 83.0 | 5.77e-01 | 100.0% | 94.6% |
| 1826179 | 2002.1.1.55 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_25 | 0.88 | 81.0 | 5.48e-01 | 100.0% | 86.5% |
| 1870502 | 2002.1.1.55 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_25 | 0.88 | 81.0 | 5.48e-01 | 100.0% | 92.5% |
| 3834882 | 2002.1.1.30 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 | 0.63 | 52.0 | 3.37e-01 | 95.7% | 93.8% |
| 3263004 | 2012.1.1.2 ↗ | a/b three-layered sandwiches › LigB-like › LigB-like › LigB-like › LigB | 0.50 | 41.0 | 2.90e-01 | 98.6% | 97.4% |
D5
medium
residues 28-42_55-157_188-203
Domain cluster:
rep: ON699007.1__UTQ79964.1__BC1_00012__00012__D9-127
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01183.27 best | Glyco_hydro_25 | 35.0 | 2.60e-08 | 98.5% | 63.9% |