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SRR1747065_scaffold_38_prodigal-single.1__X__X__00035
Bact-VirSRR1747065_scaffold_38_prodigal-single.1__X__X__00035
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 108-155
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2p0lA00 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.57 | 39.0 | 2.53e-01 | 75.0% | 61.7% |
| 1a5zA02 | 3.90.110.10 | Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal | 0.57 | 31.0 | 2.15e-01 | 93.8% | 15.1% |
| 4ovdA03 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.53 | 39.0 | 2.72e-01 | 83.3% | 75.3% |
| 1mbmD03 | 3.30.40.20 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Chymotrypsin-like serine protease; domain 3 | 0.50 | 32.0 | 3.29e-01 | 77.1% | 66.7% |
D2
high
residues 162-259
Domain cluster:
rep: IMGVR_UViG_3300018013_000490-3300018013-Ga0187873_100144020__D355-451
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF17957.8 best | Big_7 | 28.2 | 3.30e-06 | 80.6% | 97.1% |
D3
high
residues 262-364
Domain cluster:
rep: OQ095916.1__WBU76551.1__CHLORIS_142__00119__D287-387