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SRR1747065_scaffold_38_prodigal-single.1__X__X__00035

Bact-Vir

SRR1747065_scaffold_38_prodigal-single.1__X__X__00035

Identity

Kingdom:
phage

Quality

89.9 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 108-155
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2p0lA00 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.57 39.0 2.53e-01 75.0% 61.7%
1a5zA02 3.90.110.10 Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal 0.57 31.0 2.15e-01 93.8% 15.1%
4ovdA03 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.53 39.0 2.72e-01 83.3% 75.3%
1mbmD03 3.30.40.20 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Chymotrypsin-like serine protease; domain 3 0.50 32.0 3.29e-01 77.1% 66.7%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3265039 5001.1.1.5 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_3 0.53 41.0 2.73e-01 100.0% 90.7%
D2 high residues 162-259
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF17957.8 best Big_7 28.2 3.30e-06 80.6% 97.1%
D3 high residues 262-364
PDB