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SRR1747065_scaffold_38_prodigal-single.1__X__X__00076
Bact-VirSRR1747065_scaffold_38_prodigal-single.1__X__X__00076
Identity
- Kingdom:
- phage
Quality
83.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 57-278
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ni3A03 | 1.10.150.300 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Obg-related GTPase Ych/YyaF, coiled-coil domain | 0.59 | 18.0 | 2.95e-01 | 95.5% | 69.2% |
| 3jxoA00 | 3.30.70.1450 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Regulator of K+ conductance, C-terminal domain | 0.55 | 21.0 | 3.32e-01 | 84.7% | 88.1% |
| 6uv8A01 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.52 | 34.0 | 3.70e-01 | 87.4% | 78.2% |
| 7agvB01 | 3.30.70.1450 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Regulator of K+ conductance, C-terminal domain | 0.50 | 19.0 | 2.99e-01 | 71.6% | 88.9% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4066540 | 223.1.1.134 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PF30516 | 0.69 | 43.0 | 4.59e-01 | 100.0% | 70.5% |
| 3985763 | 223.1.1.35 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › sCache_3_2 | 0.68 | 44.0 | 4.60e-01 | 99.5% | 69.3% |
| 4413356 | 223.1.1.18 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › sCache_4 | 0.68 | 40.0 | 4.39e-01 | 100.0% | 68.6% |
| 3503347 | 223.1.1.18 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › sCache_4 | 0.68 | 42.0 | 4.57e-01 | 100.0% | 72.1% |
| 4673949 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.63 | 43.0 | 4.43e-01 | 100.0% | 71.9% |
| 4993526 | 101.11.1.13 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › EMC6_arch | 0.62 | 25.0 | 4.06e-01 | 86.5% | 97.7% |
| 3765989 | 223.1.1.120 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › dCache_1, VWA_N, PF30670 | 0.55 | 51.0 | 4.59e-01 | 100.0% | 99.0% |
| 3394957 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.53 | 36.0 | 4.12e-01 | 92.8% | 93.1% |
| 3965094 | 4261.1.1.0 ↗ | a+b two layers › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA C-terminal domain-like | 0.52 | 21.0 | 3.12e-01 | 74.8% | 84.4% |
| 3506162 | 223.1.1.44 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › Per3-like_PAS-A | 0.51 | 36.0 | 4.21e-01 | 91.9% | 99.4% |
| 5024288 | 305.1.1.2 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L_2 | 0.50 | 21.0 | 2.84e-01 | 78.4% | 71.4% |
D2
medium
residues 1-56
Domain cluster:
representative