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SRR1747065_scaffold_38_prodigal-single.1__X__X__00095
Bact-VirSRR1747065_scaffold_38_prodigal-single.1__X__X__00095
Identity
- Kingdom:
- phage
Quality
95.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-120
Domain cluster:
rep: aot2015-NO19_SRR1761693_USA_trim_clean_trim_clean_scaffold_5_curated_closed_complete_reversed_prodigal-single.1__X__X__00056__D2-116
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1bu8A02 | 2.60.60.20 | Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain | 0.69 | 52.0 | 5.49e-01 | 100.0% | 90.6% |
| 2nyiA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.67 | 42.0 | 4.94e-01 | 87.4% | 91.4% |
| 1zpvA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.67 | 43.0 | 5.04e-01 | 87.4% | 91.8% |
| 1sc6A03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.65 | 39.0 | 4.64e-01 | 84.9% | 86.6% |
| 1nrkA03 | 2.40.30.160 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.65 | 39.0 | 3.93e-01 | 83.2% | 58.2% |
| 1vloA04 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.61 | 43.0 | 4.78e-01 | 90.8% | 93.4% |
| 2f06A00 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.61 | 35.0 | 3.35e-01 | 86.6% | 46.5% |
| 3wdhA01 | 2.60.40.2320 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 41.0 | 4.47e-01 | 89.1% | 85.4% |
| 1wosA04 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.61 | 37.0 | 4.28e-01 | 84.9% | 84.9% |
| 2ii7H00 | 2.60.290.11 | Mainly Beta › Sandwich › Hypothetical Protein Tm1070; Chain: A › TM1070-like | 0.60 | 38.0 | 3.97e-01 | 90.8% | 69.8% |
| 3tfiA00 | 3.30.1360.120 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 | 0.59 | 37.0 | 2.62e-01 | 85.7% | 20.1% |
| 4kbxA01 | 2.40.37.30 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › | 0.58 | 36.0 | 2.93e-01 | 79.0% | 31.0% |
| 2q1fA01 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.58 | 40.0 | 3.62e-01 | 87.4% | 50.3% |
| 3girA04 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.58 | 36.0 | 4.22e-01 | 90.8% | 93.6% |
| 1js8B02 | 2.60.310.10 | Mainly Beta › Sandwich › Hemocyanin; Chain: A, domain 2 › Haemocyanin C-terminal domain | 0.58 | 44.0 | 4.60e-01 | 87.4% | 91.4% |
| 4ak1A01 | 2.60.40.2710 | Mainly Beta › Sandwich › Immunoglobulin-like › BT4661 domain 1 | 0.57 | 37.0 | 4.06e-01 | 92.4% | 82.1% |
| 1h7zA00 | 2.60.90.10 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Adenovirus pIV-related, attachment domain | 0.56 | 46.0 | 4.00e-01 | 89.9% | 82.7% |
| 2v9kA04 | 3.30.70.3190 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 44.0 | 4.64e-01 | 87.4% | 99.1% |
| 2qcuA02 | 3.30.9.10 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 | 0.55 | 40.0 | 3.61e-01 | 87.4% | 55.9% |
| 3wo4C03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 37.0 | 3.82e-01 | 88.2% | 76.6% |
| 2y7lA02 | 2.60.40.2430 | Mainly Beta › Sandwich › Immunoglobulin-like › Agglutinin-like protein, N-terminal domain, N2 subdomain | 0.53 | 43.0 | 3.97e-01 | 96.6% | 66.9% |
| 2kxtA01 | 2.60.60.30 | Mainly Beta › Sandwich › Lipoxygenase-1 › sav2460 like domains | 0.52 | 46.0 | 4.19e-01 | 100.0% | 93.5% |
| 1aqtA01 | 2.60.15.10 | Mainly Beta › Sandwich › ATP Synthase; domain 1 › F0F1 ATP synthase delta/epsilon subunit, N-terminal | 0.52 | 35.0 | 4.03e-01 | 96.6% | 94.3% |
| 2xotA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 31.0 | 3.53e-01 | 92.4% | 83.7% |
| 4bfeC01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 37.0 | 3.87e-01 | 92.4% | 85.8% |
| 4bq2D01 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.50 | 40.0 | 3.54e-01 | 88.2% | 61.9% |
| 8owfA01 | 2.60.40.290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 35.0 | 3.67e-01 | 98.3% | 78.4% |
| 5z6pA01 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.50 | 40.0 | 3.58e-01 | 88.2% | 65.2% |
| 7jooC01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 36.0 | 3.89e-01 | 94.1% | 92.8% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4268152 | 10.10.1.0 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) | 0.68 | 56.0 | 5.63e-01 | 100.0% | 88.3% |
| 3567573 | 10.10.1.0 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) | 0.67 | 55.0 | 5.54e-01 | 100.0% | 88.3% |
| 3269851 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.67 | 44.0 | 4.66e-01 | 87.4% | 75.2% |
| 5013196 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.66 | 41.0 | 4.51e-01 | 92.4% | 76.8% |
| 4067132 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 40.0 | 4.15e-01 | 95.0% | 70.0% |
| 159 | 1.1.8.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C | 0.61 | 43.0 | 4.80e-01 | 90.8% | 94.4% |
| 4952364 | 1.1.7.28 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel | 0.61 | 37.0 | 4.29e-01 | 99.2% | 84.7% |
| 3237442 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.61 | 40.0 | 4.33e-01 | 99.2% | 79.0% |
| 5037173 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.61 | 37.0 | 4.13e-01 | 99.2% | 76.8% |
| 3302977 | 207.1.1.37 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › C-JID | 0.58 | 42.0 | 3.08e-01 | 83.2% | 26.9% |
| 4224505 | 1.1.8.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C | 0.58 | 36.0 | 4.20e-01 | 84.9% | 92.5% |
| 4328611 | 1.1.8.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C | 0.58 | 36.0 | 4.03e-01 | 84.9% | 82.2% |
| 3528559 | 10.32.1.1 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Laminin_B | 0.57 | 47.0 | 4.16e-01 | 89.1% | 66.3% |
| 4455935 | 304.102.1.7 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › Pus10_C | 0.57 | 44.0 | 3.59e-01 | 87.4% | 43.6% |
| 3900933 | 11.1.1.54 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CBM_21 | 0.56 | 40.0 | 3.80e-01 | 96.6% | 62.1% |
| 5076600 | 1.1.8.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C | 0.56 | 36.0 | 3.98e-01 | 89.1% | 83.3% |
| 3261290 | 11.1.1.843 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 | 0.56 | 42.0 | 4.16e-01 | 94.1% | 76.0% |
| 3863596 | 11.1.1.3 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig | 0.56 | 39.0 | 3.75e-01 | 89.1% | 61.4% |
| 3923860 | 11.1.1.1086 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF28829 | 0.56 | 44.0 | 4.35e-01 | 88.2% | 79.2% |
| 3251680 | 11.1.1.843 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 | 0.56 | 42.0 | 4.15e-01 | 92.4% | 75.2% |
| 3376331 | 10.35.1.2 ↗ | beta sandwiches › jelly-roll › ER-derived vesicles protein Erv41p lumenal domain › ER-derived vesicles protein Erv41p lumenal domain › COPIIcoated_ERV | 0.55 | 49.0 | 4.21e-01 | 98.3% | 87.9% |
| 4391792 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.55 | 36.0 | 3.91e-01 | 100.0% | 81.1% |
| 3959310 | 10.39.1.1 ↗ | beta sandwiches › jelly-roll › Soluble domain of MmpS4 › Soluble domain of MmpS4 › Mycobact_memb | 0.55 | 36.0 | 4.03e-01 | 97.5% | 86.0% |
| 3711918 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.55 | 45.0 | 4.47e-01 | 95.8% | 85.6% |
| 3333811 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.54 | 44.0 | 3.63e-01 | 87.4% | 55.0% |
| 3041546 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.54 | 37.0 | 3.87e-01 | 88.2% | 78.3% |
| 4682467 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.54 | 34.0 | 3.75e-01 | 100.0% | 80.0% |
| 3992122 | 11.1.1.842 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CUT_C | 0.54 | 45.0 | 4.17e-01 | 92.4% | 72.0% |
| 5007278 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.53 | 39.0 | 3.81e-01 | 95.0% | 69.2% |
| 3917302 | 10.1.1.10 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM | 0.53 | 36.0 | 3.26e-01 | 87.4% | 47.6% |
| 3386065 | 9.5.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein TT1927B › Hypothetical protein TT1927B | 0.53 | 44.0 | 3.95e-01 | 91.6% | 98.2% |
| 3784415 | 11.1.1.151 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Candida_ALS_N | 0.53 | 43.0 | 3.93e-01 | 95.8% | 66.5% |
| 3489254 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.52 | 42.0 | 3.76e-01 | 100.0% | 58.4% |
| 4956917 | 11.1.1.15 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKD | 0.52 | 37.0 | 3.88e-01 | 94.1% | 82.9% |
| 3888374 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 42.0 | 4.01e-01 | 95.0% | 74.5% |
| 4069712 | 304.102.1.4 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N | 0.51 | 42.0 | 3.55e-01 | 89.1% | 59.0% |
| 5037092 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.51 | 30.0 | 3.75e-01 | 95.8% | 100.0% |
| 3801941 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.51 | 39.0 | 3.95e-01 | 95.0% | 84.3% |
| 2429645 | 10.32.1.167 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Agarase_CBM | 0.50 | 40.0 | 3.57e-01 | 88.2% | 63.2% |
| 3840132 | 9.5.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein TT1927B › Hypothetical protein TT1927B › YceI | 0.50 | 42.0 | 3.80e-01 | 91.6% | 97.6% |
| 3279096 | 10.37.1.1 ↗ | beta sandwiches › jelly-roll › TerD › TerD › TerD | 0.50 | 44.0 | 3.90e-01 | 100.0% | 88.5% |