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SRR1747065_scaffold_38_prodigal-single.1__X__X__00102
Bact-VirSRR1747065_scaffold_38_prodigal-single.1__X__X__00102
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-74
Domain cluster:
rep: MF360958.1__ASV44115.1__PBI_SCTP2_100__00100__D3-70
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2f4mA02 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.62 | 35.0 | 4.00e-01 | 88.7% | 78.0% |
| 1s7mA03 | 2.20.25.140 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.54 | 24.0 | 3.16e-01 | 97.2% | 100.0% |
| 2cr4A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.53 | 34.0 | 3.06e-01 | 100.0% | 46.5% |
| 1x0tA02 | 6.20.50.20 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.52 | 26.0 | 3.14e-01 | 93.0% | 73.3% |
| 1o9aA01 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.50 | 29.0 | 3.40e-01 | 100.0% | 90.9% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4379563 | 375.1.1.289 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF5679 | 0.61 | 29.0 | 3.56e-01 | 88.7% | 71.1% |
| 4027507 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.57 | 30.0 | 2.52e-01 | 90.1% | 30.0% |
| 4928794 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 28.0 | 3.33e-01 | 88.7% | 71.1% |
| 4972785 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.54 | 31.0 | 3.46e-01 | 100.0% | 77.6% |
| 3527721 | 384.1.1.1 ↗ | few secondary structure elements › BPTI-like › BPTI-like › BPTI-like › Kunitz_BPTI | 0.54 | 31.0 | 3.28e-01 | 88.7% | 63.3% |
| 5028378 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.52 | 26.0 | 3.11e-01 | 90.1% | 71.1% |
| 3697241 | 4100.1.1.0 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like | 0.52 | 31.0 | 3.46e-01 | 90.1% | 79.2% |
| 3574486 | 384.1.1.1 ↗ | few secondary structure elements › BPTI-like › BPTI-like › BPTI-like › Kunitz_BPTI | 0.52 | 30.0 | 3.44e-01 | 95.8% | 78.0% |
| 4138663 | 4099.1.1.3 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Spc24 | 0.51 | 29.0 | 3.07e-01 | 95.8% | 60.0% |
| 3940986 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.51 | 33.0 | 3.25e-01 | 100.0% | 62.7% |
| 3622053 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 30.0 | 2.77e-01 | 97.2% | 41.0% |