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SRR1747065_scaffold_38_prodigal-single.1__X__X__00134
Bact-VirSRR1747065_scaffold_38_prodigal-single.1__X__X__00134
Identity
- Kingdom:
- phage
Quality
66.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 55-163
Domain cluster:
representative
CATH (35)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1fo0B00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 48.0 | 4.80e-01 | 95.4% | 82.1% |
| 3j4uH00 | 2.60.120.1110 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 46.0 | 4.22e-01 | 80.7% | 84.3% |
| 4lr4A01 | 2.60.120.1420 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 43.0 | 3.72e-01 | 100.0% | 48.3% |
| 2wmfA03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.59 | 37.0 | 3.57e-01 | 97.2% | 54.8% |
| 4fgmA01 | 2.60.40.3650 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 41.0 | 3.54e-01 | 100.0% | 46.5% |
| 1bdyA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.58 | 45.0 | 4.33e-01 | 85.3% | 73.2% |
| 2oyzA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.58 | 39.0 | 4.11e-01 | 100.0% | 78.7% |
| 2vrqA01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.58 | 43.0 | 4.07e-01 | 100.0% | 64.4% |
| 5eliA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 45.0 | 4.48e-01 | 92.7% | 82.1% |
| 1od3A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.57 | 40.0 | 3.82e-01 | 95.4% | 61.1% |
| 3tesA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 37.0 | 3.97e-01 | 100.0% | 78.7% |
| 4ca9A00 | 2.60.120.340 | Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain | 0.55 | 41.0 | 4.35e-01 | 99.1% | 88.8% |
| 1q8mA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 43.0 | 4.17e-01 | 91.7% | 75.2% |
| 1ig0A02 | 2.60.120.320 | Mainly Beta › Sandwich › Jelly Rolls › Thiamin pyrophosphokinase, thiamin-binding domain | 0.55 | 41.0 | 3.89e-01 | 96.3% | 66.2% |
| 6a48A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 41.0 | 3.79e-01 | 95.4% | 61.3% |
| 1ahsA00 | 2.60.120.170 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 43.0 | 4.14e-01 | 96.3% | 73.8% |
| 3py9A04 | 2.60.40.2560 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 31.0 | 3.62e-01 | 88.1% | 80.8% |
| 2gnxA02 | 3.30.450.240 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.53 | 36.0 | 3.63e-01 | 82.6% | 68.8% |
| 7tg5A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 40.0 | 4.05e-01 | 100.0% | 80.4% |
| 2qjvA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 39.0 | 3.94e-01 | 100.0% | 76.1% |
| 2pfwA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 36.0 | 3.63e-01 | 100.0% | 68.5% |
| 2yjlA00 | 2.60.40.2990 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 36.0 | 3.69e-01 | 93.6% | 72.2% |
| 1eajB00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 43.0 | 4.26e-01 | 95.4% | 84.2% |
| 7uzsX01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 44.0 | 4.21e-01 | 93.6% | 90.1% |
| 1o59A01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 44.0 | 3.81e-01 | 93.6% | 61.6% |
| 3u83A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 40.0 | 4.05e-01 | 91.7% | 83.5% |
| 3ugfB02 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.52 | 46.0 | 3.90e-01 | 97.2% | 97.7% |
| 1zldA00 | 2.60.40.1920 | Mainly Beta › Sandwich › Immunoglobulin-like › Proteinaceous host-selective toxin ToxA | 0.52 | 43.0 | 4.47e-01 | 94.5% | 98.0% |
| 7lvzA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 39.0 | 3.09e-01 | 97.2% | 38.8% |
| 2dmkA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 38.0 | 3.91e-01 | 97.2% | 82.5% |
| 7oo1A01 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.51 | 33.0 | 3.76e-01 | 90.8% | 93.5% |
| 1w63Q00 | 3.30.450.60 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.51 | 30.0 | 2.76e-01 | 89.0% | 41.9% |
| 4oq8A00 | 2.60.120.220 | Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain | 0.50 | 44.0 | 4.06e-01 | 97.2% | 80.6% |
| 4gucA00 | 2.60.40.3720 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 41.0 | 4.04e-01 | 96.3% | 83.5% |
| 4eisA00 | 2.70.50.70 | Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › | 0.50 | 44.0 | 3.55e-01 | 100.0% | 51.3% |
ECOD (46)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2452961 | 3386.1.1.3 ↗ | beta sandwiches › gp9 C-terminal domain-like › gp9 C-terminal domain-related › gp9 C-terminal domain-related › ORF68_C | 0.65 | 59.0 | 5.66e-01 | 98.2% | 95.9% |
| 3790948 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.62 | 50.0 | 4.78e-01 | 86.2% | 77.6% |
| 4864730 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.62 | 48.0 | 4.77e-01 | 95.4% | 79.1% |
| 3413788 | 11.2.1.8 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PTEN_C2 | 0.61 | 48.0 | 4.39e-01 | 83.5% | 77.9% |
| 3819714 | 11.2.1.8 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PTEN_C2 | 0.61 | 48.0 | 4.27e-01 | 84.4% | 83.1% |
| 1875530 | 12.3.1.19 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 | 0.61 | 45.0 | 3.52e-01 | 78.9% | 41.6% |
| 3678764 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.60 | 42.0 | 4.27e-01 | 90.8% | 74.3% |
| 3475565 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.59 | 37.0 | 3.96e-01 | 98.2% | 71.6% |
| 3715053 | 11.2.1.23 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › B9-C2 | 0.59 | 46.0 | 3.95e-01 | 85.3% | 83.8% |
| 3522169 | 11.1.4.100 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CILP_8th | 0.59 | 39.0 | 3.35e-01 | 86.2% | 43.5% |
| 3466123 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.58 | 43.0 | 3.21e-01 | 78.9% | 48.8% |
| 3588730 | 4182.1.1.0 ↗ | beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like | 0.58 | 40.0 | 4.28e-01 | 100.0% | 82.1% |
| 3741599 | 10.12.1.5 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › PMI_typeI_C | 0.58 | 38.0 | 4.06e-01 | 97.2% | 76.8% |
| 4981984 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 37.0 | 3.85e-01 | 88.1% | 70.0% |
| 3224575 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 38.0 | 4.12e-01 | 92.7% | 82.2% |
| 3562605 | 12.5.1.2 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › GPS | 0.56 | 42.0 | 3.39e-01 | 100.0% | 40.0% |
| 3964117 | 4182.1.1.3 ↗ | beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like › Gp53-like_C | 0.56 | 41.0 | 4.39e-01 | 97.2% | 87.4% |
| 4018427 | 10.9.1.0 ↗ | beta sandwiches › jelly-roll › C-terminal domain of mullusc hemocyanin › C-terminal domain of mullusc hemocyanin | 0.56 | 40.0 | 4.28e-01 | 88.1% | 84.2% |
| 3214984 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.56 | 39.0 | 3.83e-01 | 71.6% | 91.3% |
| 3601653 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.55 | 36.0 | 3.30e-01 | 97.2% | 48.0% |
| 370857 | 10.11.1.1 ↗ | beta sandwiches › jelly-roll › Thiamin pyrophosphokinase, substrate-binding domain › Thiamin pyrophosphokinase, substrate-binding domain › TPK_B1_binding | 0.55 | 37.0 | 4.18e-01 | 97.2% | 95.0% |
| 2491354 | 4182.1.1.3 ↗ | beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like › Gp53-like_C | 0.54 | 41.0 | 4.31e-01 | 100.0% | 89.6% |
| 3537286 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.54 | 38.0 | 3.90e-01 | 97.2% | 75.2% |
| 4623622 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.54 | 40.0 | 4.28e-01 | 97.2% | 91.6% |
| 3443343 | 11.10.1.5 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 | 0.54 | 48.0 | 4.34e-01 | 97.2% | 92.4% |
| 3886025 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.54 | 35.0 | 3.76e-01 | 97.2% | 78.9% |
| 3908056 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.54 | 43.0 | 3.52e-01 | 93.6% | 45.9% |
| 3919171 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 48.0 | 3.65e-01 | 100.0% | 71.2% |
| 4121956 | 11.1.1.1280 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF29750 | 0.53 | 41.0 | 4.06e-01 | 95.4% | 78.3% |
| 5079671 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.53 | 36.0 | 3.64e-01 | 85.3% | 68.2% |
| 1714452 | 11.21.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein › TSP_Ig-like | 0.53 | 40.0 | 4.36e-01 | 95.4% | 100.0% |
| 5048934 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.52 | 36.0 | 3.69e-01 | 100.0% | 73.8% |
| 4135250 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.52 | 46.0 | 3.18e-01 | 95.4% | 34.0% |
| 4972564 | 1.1.15.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK | 0.52 | 36.0 | 3.80e-01 | 95.4% | 82.1% |
| 5039035 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.52 | 42.0 | 4.43e-01 | 88.1% | 96.9% |
| 3407995 | 11.1.1.536 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF1091 | 0.51 | 39.0 | 3.55e-01 | 82.6% | 96.8% |
| 3909301 | 10.32.1.77 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Reelin_subrepeat-B | 0.51 | 41.0 | 3.98e-01 | 96.3% | 76.0% |
| 3171619 | 11.1.1.643 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig-like_POM152 | 0.51 | 36.0 | 3.92e-01 | 95.4% | 88.9% |
| 5034806 | 11.1.1.284 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKD_4 | 0.51 | 34.0 | 3.65e-01 | 95.4% | 81.1% |
| 3199216 | 10.32.1.203 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin | 0.51 | 45.0 | 3.94e-01 | 95.4% | 81.9% |
| 3939889 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 35.0 | 3.71e-01 | 93.6% | 79.0% |
| 5061052 | 11.1.1.148 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › FixG_C | 0.51 | 35.0 | 3.69e-01 | 91.7% | 79.0% |
| 3484653 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.50 | 38.0 | 3.83e-01 | 98.2% | 80.9% |
| 4468653 | 1.1.15.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK | 0.50 | 35.0 | 3.70e-01 | 95.4% | 83.2% |
| 153078 | 11.1.1.219 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF5065 | 0.50 | 41.0 | 4.04e-01 | 96.3% | 83.5% |
| 3376236 | 10.1.1.26 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_32C | 0.50 | 45.0 | 3.65e-01 | 98.2% | 95.5% |
D2
medium
residues 1-54