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SRR1747065_scaffold_38_prodigal-single.1__X__X__00234
Bact-VirSRR1747065_scaffold_38_prodigal-single.1__X__X__00234
Identity
- Kingdom:
- phage
Quality
63.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-68
Domain cluster:
rep: NC_024215.1__YP_009036901.1__GJ21_gp76__00076__D187-261
CATH (59)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4krtB03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.89 | 78.0 | 7.70e-01 | 93.8% | 100.0% |
| 8b2gA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.87 | 68.0 | 7.13e-01 | 82.8% | 100.0% |
| 3npfB01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.86 | 80.0 | 7.92e-01 | 98.4% | 97.0% |
| 2krsA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.86 | 73.0 | 7.50e-01 | 90.6% | 100.0% |
| 1r77A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.85 | 78.0 | 6.61e-01 | 98.4% | 81.8% |
| 6bioA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.85 | 69.0 | 7.31e-01 | 87.5% | 100.0% |
| 2mk5A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.84 | 76.0 | 5.88e-01 | 98.4% | 64.1% |
| 4epcA02 | 2.30.30.170 | Mainly Beta › Roll › SH3 type barrels. › | 0.83 | 73.0 | 7.10e-01 | 96.9% | 97.2% |
| 3npfA02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.82 | 72.0 | 6.99e-01 | 95.3% | 90.0% |
| 1xovA02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.78 | 67.0 | 6.65e-01 | 95.3% | 97.0% |
| 4iimA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.78 | 63.0 | 6.68e-01 | 96.9% | 98.2% |
| 1x6bA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.76 | 64.0 | 6.44e-01 | 98.4% | 92.2% |
| 1x43A01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.76 | 66.0 | 6.74e-01 | 100.0% | 98.4% |
| 2evrA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.75 | 65.0 | 6.19e-01 | 96.9% | 89.2% |
| 2ekhA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.75 | 63.0 | 5.84e-01 | 100.0% | 73.8% |
| 2vknA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.74 | 66.0 | 6.55e-01 | 100.0% | 93.9% |
| 2ct4A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.74 | 62.0 | 6.06e-01 | 96.9% | 84.3% |
| 1lckA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.73 | 61.0 | 6.28e-01 | 96.9% | 98.3% |
| 2v1qA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.73 | 61.0 | 6.34e-01 | 96.9% | 100.0% |
| 2jxbA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.72 | 61.0 | 5.50e-01 | 98.4% | 68.6% |
| 2dmoA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.71 | 58.0 | 5.77e-01 | 98.4% | 85.3% |
| 1yn8A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.71 | 59.0 | 6.12e-01 | 96.9% | 100.0% |
| 1tg0A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.70 | 64.0 | 6.34e-01 | 100.0% | 97.0% |
| 3nmzD00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.70 | 63.0 | 5.77e-01 | 100.0% | 77.4% |
| 2kxcA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.69 | 60.0 | 5.92e-01 | 96.9% | 91.0% |
| 2egeA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.69 | 61.0 | 5.84e-01 | 98.4% | 88.0% |
| 1u3oA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.68 | 56.0 | 5.73e-01 | 93.8% | 98.4% |
| 1awoA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.67 | 53.0 | 5.53e-01 | 96.9% | 100.0% |
| 1k1zA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.66 | 55.0 | 5.25e-01 | 96.9% | 85.9% |
| 3upuA03 | 2.30.30.780 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 55.0 | 4.40e-01 | 98.4% | 96.2% |
| 1vq8T00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 51.0 | 4.22e-01 | 100.0% | 49.6% |
| 1dj7B00 | 2.30.30.50 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 51.0 | 4.99e-01 | 98.4% | 98.6% |
| 2lsmA00 | 3.40.5.70 | Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › DNA packaging chaperone protein FI, C-terminal beta-strand domain | 0.60 | 47.0 | 4.82e-01 | 98.4% | 88.5% |
| 1vwxY00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 49.0 | 3.93e-01 | 100.0% | 44.8% |
| 1ft9A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.58 | 43.0 | 3.54e-01 | 100.0% | 41.2% |
| 2fmyA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 45.0 | 3.60e-01 | 100.0% | 41.9% |
| 5d1iA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 48.0 | 4.00e-01 | 100.0% | 53.0% |
| 2m9uA00 | 2.30.30.850 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 50.0 | 4.47e-01 | 100.0% | 88.8% |
| 1omiA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.56 | 49.0 | 4.17e-01 | 100.0% | 61.9% |
| 1hw5A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.55 | 48.0 | 3.87e-01 | 100.0% | 49.6% |
| 2xhkB01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.55 | 47.0 | 3.90e-01 | 100.0% | 52.8% |
| 5j3uA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.55 | 46.0 | 3.77e-01 | 100.0% | 50.0% |
| 1tc5C00 | 3.50.80.10 | Alpha Beta › 3-Layer(bba) Sandwich › D-tyrosyl-trna(Tyr) Deacylase; Chain: A; › D-tyrosyl-tRNA(Tyr) deacylase | 0.54 | 46.0 | 3.39e-01 | 100.0% | 97.3% |
| 3iwzA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 46.0 | 3.71e-01 | 100.0% | 47.8% |
| 3gydA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 44.0 | 3.30e-01 | 100.0% | 34.3% |
| 2h6cA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 43.0 | 3.46e-01 | 100.0% | 45.7% |
| 2z69B00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 45.0 | 3.52e-01 | 100.0% | 42.7% |
| 5wxuA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 44.0 | 3.30e-01 | 100.0% | 37.0% |
| 2fd8A01 | 2.60.120.590 | Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like | 0.52 | 44.0 | 3.20e-01 | 100.0% | 35.7% |
| 1vq8B02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.52 | 47.0 | 3.62e-01 | 100.0% | 91.2% |
| 2zcwA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 43.0 | 3.70e-01 | 100.0% | 56.2% |
| 1fxzA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 43.0 | 3.21e-01 | 100.0% | 36.6% |
| 6l4cA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 45.0 | 3.28e-01 | 100.0% | 47.3% |
| 1jb0D00 | 3.30.1470.10 | Alpha Beta › 2-Layer Sandwich › Photosystem 1 Reaction Centre Subunit Ii; Chain: D; › Photosystem I PsaD, reaction center subunit II | 0.51 | 43.0 | 3.47e-01 | 100.0% | 49.3% |
| 7pzaA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 41.0 | 3.44e-01 | 100.0% | 50.0% |
| 4lejA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 45.0 | 3.28e-01 | 100.0% | 47.2% |
| 4lb8A02 | 2.60.40.3900 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 43.0 | 3.47e-01 | 100.0% | 52.6% |
| 1cauA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.50 | 41.0 | 3.03e-01 | 100.0% | 32.6% |
| 2qcsB02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.50 | 43.0 | 3.50e-01 | 100.0% | 50.4% |
ECOD (87)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4520767 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.90 | 79.0 | 7.68e-01 | 93.8% | 88.6% |
| 3840076 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.89 | 77.0 | 7.93e-01 | 90.6% | 100.0% |
| 4038705 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.89 | 79.0 | 7.90e-01 | 95.3% | 98.5% |
| 4550532 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.88 | 80.0 | 7.02e-01 | 96.9% | 72.2% |
| 4386715 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.88 | 80.0 | 7.23e-01 | 98.4% | 95.3% |
| 3700744 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.88 | 81.0 | 6.83e-01 | 98.4% | 99.0% |
| 1290375 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.88 | 77.0 | 7.60e-01 | 95.3% | 100.0% |
| 4602101 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.87 | 80.0 | 8.02e-01 | 98.4% | 98.5% |
| 1673571 | 4.1.1.120 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_16 | 0.87 | 82.0 | 7.64e-01 | 100.0% | 89.5% |
| 4031670 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.86 | 72.0 | 7.46e-01 | 89.1% | 98.3% |
| 4196229 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.86 | 77.0 | 7.44e-01 | 95.3% | 90.0% |
| 4207556 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.86 | 77.0 | 7.49e-01 | 96.9% | 100.0% |
| 4127826 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.86 | 79.0 | 7.86e-01 | 98.4% | 100.0% |
| 137916 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.86 | 74.0 | 7.45e-01 | 93.8% | 95.4% |
| 4340107 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.86 | 74.0 | 7.01e-01 | 93.8% | 96.0% |
| 4009391 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.86 | 76.0 | 6.98e-01 | 95.3% | 85.0% |
| 3165077 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.85 | 72.0 | 7.02e-01 | 90.6% | 87.1% |
| 3204891 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.85 | 76.0 | 7.14e-01 | 95.3% | 98.7% |
| 4358722 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.85 | 76.0 | 6.28e-01 | 95.3% | 60.0% |
| 4084890 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.85 | 72.0 | 7.22e-01 | 90.6% | 100.0% |
| 3387889 | 4.1.1.451 ↗ | beta barrels › SH3 › SH3 › SH3 › N_NLPC_P60, SH3_6, SH3_7 | 0.85 | 78.0 | 5.15e-01 | 100.0% | 34.9% |
| 4427420 | 4.1.1.436 ↗ | beta barrels › SH3 › SH3 › SH3 › PF29249 | 0.85 | 78.0 | 7.20e-01 | 98.4% | 85.0% |
| 137947 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.85 | 75.0 | 7.46e-01 | 96.9% | 97.0% |
| 4303967 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.85 | 76.0 | 6.69e-01 | 96.9% | 96.7% |
| 2410170 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.85 | 75.0 | 7.62e-01 | 96.9% | 100.0% |
| 3700747 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.85 | 78.0 | 6.88e-01 | 100.0% | 94.4% |
| 4032300 | 4.1.1.59 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_5 | 0.84 | 75.0 | 6.65e-01 | 96.9% | 88.9% |
| 4041535 | 4.1.1.59 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_5 | 0.84 | 76.0 | 6.77e-01 | 98.4% | 92.0% |
| 4091791 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.84 | 73.0 | 6.88e-01 | 93.8% | 88.0% |
| 4091533 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.84 | 76.0 | 7.35e-01 | 98.4% | 97.1% |
| 1905739 | 4.1.1.59 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_5 | 0.83 | 75.0 | 6.77e-01 | 98.4% | 94.2% |
| 3715828 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.83 | 74.0 | 6.86e-01 | 98.4% | 95.0% |
| 1263586 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.83 | 73.0 | 7.05e-01 | 96.9% | 88.9% |
| 3838574 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.83 | 65.0 | 6.99e-01 | 84.4% | 100.0% |
| 3988893 | 4.1.1.59 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_5 | 0.82 | 71.0 | 6.67e-01 | 92.2% | 85.3% |
| 3278325 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.82 | 67.0 | 6.97e-01 | 87.5% | 100.0% |
| 1263580 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.82 | 72.0 | 6.87e-01 | 96.9% | 85.3% |
| 4682138 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.81 | 73.0 | 6.90e-01 | 98.4% | 93.3% |
| 2410169 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.81 | 72.0 | 6.59e-01 | 98.4% | 81.9% |
| 4650162 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.80 | 71.0 | 7.12e-01 | 98.4% | 98.5% |
| 3707023 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.80 | 72.0 | 6.11e-01 | 98.4% | 81.0% |
| 4291404 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.79 | 69.0 | 6.54e-01 | 95.3% | 88.0% |
| 3243949 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.78 | 66.0 | 6.83e-01 | 96.9% | 98.3% |
| 3908332 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.78 | 66.0 | 6.64e-01 | 96.9% | 90.8% |
| 3594081 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 67.0 | 6.25e-01 | 98.4% | 98.8% |
| 4995699 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 56.0 | 5.49e-01 | 100.0% | 71.4% |
| 3978088 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 70.0 | 6.97e-01 | 98.4% | 96.9% |
| 3396896 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 67.0 | 6.33e-01 | 95.3% | 82.7% |
| 4446467 | 4.1.1.278 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_YKFC_2nd | 0.76 | 66.0 | 6.61e-01 | 98.4% | 93.8% |
| 3903323 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.76 | 63.0 | 6.02e-01 | 100.0% | 77.3% |
| 3864347 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.75 | 67.0 | 6.69e-01 | 96.9% | 100.0% |
| 3998645 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.75 | 64.0 | 6.36e-01 | 100.0% | 90.8% |
| 3512420 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.74 | 61.0 | 5.58e-01 | 100.0% | 68.2% |
| 3599257 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 63.0 | 6.30e-01 | 100.0% | 92.3% |
| 3623786 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.74 | 61.0 | 6.11e-01 | 100.0% | 89.2% |
| 3490689 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.73 | 62.0 | 6.07e-01 | 100.0% | 85.7% |
| 4013671 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 58.0 | 6.16e-01 | 92.2% | 100.0% |
| 3931418 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 61.0 | 6.29e-01 | 98.4% | 96.7% |
| 3523046 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.73 | 60.0 | 5.47e-01 | 100.0% | 68.2% |
| 532 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.73 | 66.0 | 5.71e-01 | 100.0% | 69.8% |
| 3259043 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.72 | 63.0 | 6.16e-01 | 100.0% | 88.6% |
| 3788449 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.72 | 61.0 | 5.93e-01 | 98.4% | 85.7% |
| 1386398 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.71 | 58.0 | 5.50e-01 | 95.3% | 76.0% |
| 3692073 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.71 | 59.0 | 5.75e-01 | 98.4% | 84.3% |
| 4664510 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.69 | 55.0 | 5.48e-01 | 93.8% | 84.6% |
| 3399557 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 59.0 | 5.80e-01 | 98.4% | 100.0% |
| 4396355 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.66 | 53.0 | 4.88e-01 | 100.0% | 68.2% |
| 3624307 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 57.0 | 4.84e-01 | 100.0% | 78.2% |
| 4675879 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.66 | 58.0 | 3.82e-01 | 100.0% | 28.3% |
| 4614716 | 4.1.1.292 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_Rv2311 | 0.65 | 54.0 | 5.32e-01 | 93.8% | 100.0% |
| 3698096 | 219.1.1.115 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › AIM3_BBC1_C | 0.62 | 53.0 | 3.93e-01 | 100.0% | 46.1% |
| 2325643 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.61 | 46.0 | 3.70e-01 | 100.0% | 40.0% |
| 4030073 | 4076.3.1.0 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain | 0.61 | 47.0 | 3.55e-01 | 100.0% | 34.8% |
| 4025911 | 4076.3.1.0 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain | 0.61 | 46.0 | 4.73e-01 | 96.9% | 86.7% |
| 218750 | 4076.3.1.1 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain › Packaging_FI | 0.60 | 47.0 | 4.82e-01 | 98.4% | 88.5% |
| 315942 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.59 | 45.0 | 3.53e-01 | 100.0% | 37.2% |
| 3977355 | 4076.3.1.1 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain › Packaging_FI | 0.58 | 45.0 | 4.79e-01 | 98.4% | 98.1% |
| 1684573 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.57 | 48.0 | 4.00e-01 | 100.0% | 53.0% |
| 3591095 | 2494.1.1.0 ↗ | a/b three-layered sandwiches › DTD-like › DTD-like (Pfam 02580) › DTD-like (Pfam 02580) | 0.54 | 46.0 | 3.38e-01 | 100.0% | 95.3% |
| 3889409 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.54 | 46.0 | 3.28e-01 | 100.0% | 30.7% |
| 3226640 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 43.0 | 3.84e-01 | 93.8% | 69.7% |
| 4133110 | 2494.1.1.1 ↗ | a/b three-layered sandwiches › DTD-like › DTD-like (Pfam 02580) › DTD-like (Pfam 02580) › Tyr_Deacylase | 0.54 | 45.0 | 3.52e-01 | 100.0% | 98.1% |
| 3587405 | 10.32.1.285 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › RodZ_C | 0.53 | 44.0 | 3.89e-01 | 100.0% | 61.6% |
| 5036138 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.52 | 45.0 | 4.16e-01 | 100.0% | 74.1% |
| 4301645 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.52 | 43.0 | 3.45e-01 | 100.0% | 45.0% |
| 5055293 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.51 | 44.0 | 4.06e-01 | 100.0% | 83.5% |
| 3231885 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.50 | 42.0 | 3.50e-01 | 100.0% | 64.8% |
D2
medium
residues 257-320_432-465
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1s7zA01 | 1.20.120.780 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DNA mimic ocr | 0.78 | 36.0 | 3.56e-01 | 90.8% | 42.6% |
| 3psfA02 | 1.10.10.650 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › RuvA domain 2-like | 0.51 | 45.0 | 4.01e-01 | 98.0% | 81.2% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1736237 | 171.1.1.4 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonucleas_3_3 | 0.54 | 40.0 | 3.63e-01 | 78.6% | 85.1% |
| 4936129 | 5067.1.1.2 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › SecD_SecF | 0.52 | 42.0 | 3.27e-01 | 90.8% | 63.0% |
D3
medium
residues 321-338_415-431_482-551
Domain cluster:
rep: pre3_saliva_scaffold_6_prodigal-single.1__X__X__00185__D409-448_513-610
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2rjzA02 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.64 | 45.0 | 4.62e-01 | 86.7% | 75.8% |
| 1uokA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.61 | 38.0 | 4.39e-01 | 83.8% | 85.9% |
| 3uezC02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 35.0 | 3.90e-01 | 89.5% | 72.3% |
| 3onrJ00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.60 | 37.0 | 4.41e-01 | 70.5% | 95.6% |
| 4v19W00 | 3.90.470.10 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17 | 0.59 | 45.0 | 3.94e-01 | 82.9% | 78.9% |
| 1o0vA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 42.0 | 4.14e-01 | 89.5% | 70.0% |
| 4k7rA02 | 2.20.200.10 | Mainly Beta › Single Sheet › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.57 | 30.0 | 3.49e-01 | 87.6% | 68.8% |
| 5mmjj00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.57 | 39.0 | 4.04e-01 | 70.5% | 79.8% |
| 5x8tT00 | 3.90.470.10 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17 | 0.56 | 41.0 | 3.74e-01 | 78.1% | 80.6% |
| 5oj2B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 36.0 | 3.80e-01 | 85.7% | 74.0% |
| 4hudA01 | 3.30.2000.40 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Myoviridae tail sheath stabiliser | 0.54 | 44.0 | 3.52e-01 | 88.6% | 65.7% |
| 4acvA00 | 3.30.2000.30 | Alpha Beta › 2-Layer Sandwich › STM4215-like › | 0.52 | 43.0 | 4.16e-01 | 89.5% | 80.7% |
| 1vzyA01 | 3.55.30.10 | Alpha Beta › 3-Layer(bab) Sandwich › Hsp33 domain › Hsp33 domain | 0.52 | 41.0 | 3.18e-01 | 84.8% | 77.4% |
| 4z9eA00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.50 | 37.0 | 3.99e-01 | 84.8% | 95.3% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4995818 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.68 | 57.0 | 5.36e-01 | 88.6% | 76.8% |
| 3275908 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 41.0 | 4.89e-01 | 86.7% | 100.0% |
| 3964535 | 310.3.1.1 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › PilO | 0.62 | 47.0 | 4.58e-01 | 89.5% | 73.0% |
| 3764712 | 11.1.1.118 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Adhes-Ig_like | 0.59 | 44.0 | 4.11e-01 | 90.5% | 63.8% |
| 3978576 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.58 | 45.0 | 4.49e-01 | 85.7% | 78.2% |
| 5019910 | 11.1.1.130 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Inhibitor_I42 | 0.57 | 40.0 | 3.93e-01 | 88.6% | 67.0% |
| 4627678 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.56 | 44.0 | 4.28e-01 | 84.8% | 80.8% |
| 3933746 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.56 | 43.0 | 4.16e-01 | 88.6% | 70.8% |
| 4122624 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.56 | 44.0 | 4.26e-01 | 84.8% | 80.8% |
| 3613691 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.54 | 40.0 | 3.88e-01 | 80.0% | 68.3% |
| 5046996 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 39.0 | 3.92e-01 | 86.7% | 73.1% |
| 4613758 | 304.18.1.1 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB | 0.54 | 37.0 | 3.70e-01 | 70.5% | 71.6% |
| 4975017 | 11.1.1.130 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Inhibitor_I42 | 0.54 | 37.0 | 3.79e-01 | 85.7% | 72.1% |
| 3698699 | 5090.1.1.7 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › HAP2-GCS1 | 0.53 | 41.0 | 2.86e-01 | 83.8% | 97.8% |
| 3979231 | 872.1.1.4 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like › DUF4312 | 0.53 | 37.0 | 3.88e-01 | 71.4% | 89.5% |
| 4609163 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.52 | 40.0 | 3.04e-01 | 81.9% | 57.5% |
| 3690806 | 304.133.1.1 ↗ | a+b two layers › Alpha-beta plaits › 26 kDa periplasmic immunogenic protein › 26 kDa periplasmic immunogenic protein › SIMPL | 0.52 | 37.0 | 3.46e-01 | 75.2% | 82.2% |
| 3994571 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 42.0 | 3.65e-01 | 89.5% | 56.9% |
| 4656922 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.52 | 31.0 | 3.05e-01 | 81.9% | 51.7% |
| 3478952 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.51 | 41.0 | 3.72e-01 | 85.7% | 86.4% |
| 3612888 | 304.31.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMG-CoA reductase › NAD-binding domain of HMG-CoA reductase | 0.51 | 36.0 | 3.46e-01 | 82.9% | 63.3% |
| 4949339 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 41.0 | 3.71e-01 | 86.7% | 78.6% |
| 4879469 | 11.12.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD | 0.50 | 42.0 | 3.21e-01 | 90.5% | 57.8% |
| 3264438 | 12.3.1.46 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › ComC_SSD | 0.50 | 40.0 | 3.12e-01 | 89.5% | 87.1% |
D4
medium
residues 552-617