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SRR1747065_scaffold_38_prodigal-single.1__X__X__00253

Bact-Vir

SRR1747065_scaffold_38_prodigal-single.1__X__X__00253

Identity

Kingdom:
phage

Quality

65.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-157
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2mqkA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.57 27.0 3.84e-01 76.9% 100.0%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4106860 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.67 32.0 4.03e-01 81.6% 72.6%
4529157 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.67 32.0 4.10e-01 81.6% 76.7%
3873677 101.1.1.24 ↗ alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.66 28.0 4.09e-01 73.5% 85.7%
3753093 101.1.1.24 ↗ alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.65 27.0 4.17e-01 73.5% 90.8%
3693312 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.65 28.0 4.26e-01 70.7% 100.0%
3218722 101.1.1.52 ↗ alpha arrays › HTH › HTH › Three-helical HTH › BrkDBD 0.62 26.0 3.92e-01 74.1% 90.8%
4944887 101.1.1.546 ↗ alpha arrays › HTH › HTH › Three-helical HTH › ThiN 0.57 36.0 4.04e-01 74.8% 78.3%
5021233 101.1.6.40 ↗ alpha arrays › HTH › HTH › TrpR › DUF1670 0.55 31.0 3.90e-01 73.5% 90.0%
4093687 101.1.1.107 ↗ alpha arrays › HTH › HTH › Three-helical HTH › DUF134 0.54 33.0 4.13e-01 70.1% 100.0%
5071227 2005.1.1.18 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase 0.51 35.0 2.75e-01 70.1% 97.7%