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SRR1747065_scaffold_38_prodigal-single.1__X__X__00262
Bact-VirSRR1747065_scaffold_38_prodigal-single.1__X__X__00262
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-81
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3we5A00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.58 | 46.0 | 3.91e-01 | 88.9% | 85.8% |
| 2laeA00 | 3.30.310.170 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Outer membrane protein assembly factor BamC | 0.55 | 41.0 | 3.67e-01 | 79.0% | 68.6% |
| 3e8pA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.54 | 42.0 | 3.42e-01 | 84.0% | 85.0% |
| 2yh6D00 | 3.30.530.50 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › | 0.54 | 40.0 | 3.66e-01 | 80.2% | 70.9% |
| 2h2yA01 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.53 | 42.0 | 3.79e-01 | 86.4% | 62.1% |
| 2f4wB00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.53 | 41.0 | 3.40e-01 | 85.2% | 63.8% |
| 4nkbA01 | 3.30.1120.120 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.51 | 37.0 | 3.41e-01 | 79.0% | 73.7% |
| 2dayA01 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.50 | 39.0 | 3.57e-01 | 86.4% | 72.6% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3964460 | 331.4.1.31 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › PF29358 | 0.57 | 43.0 | 3.52e-01 | 81.5% | 67.1% |
| 3783515 | 222.1.1.3 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › Acyl_CoA_thio | 0.56 | 42.0 | 3.39e-01 | 81.5% | 76.2% |
| 427806 | 331.3.1.8 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Lipoprotein_18 | 0.55 | 40.0 | 3.61e-01 | 79.0% | 65.8% |
| 3434765 | 5.1.4.44 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1_2 | 0.55 | 37.0 | 2.47e-01 | 70.4% | 21.4% |
| 3208851 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.55 | 42.0 | 3.69e-01 | 82.7% | 60.8% |
| 4571673 | 331.22.1.2 ↗ | a+b two layers › TBP-like › Outer membrane protein assembly factor BamC › Outer membrane protein assembly factor BamC › PF29358 | 0.55 | 41.0 | 3.24e-01 | 81.5% | 56.1% |
| 4059795 | 331.3.1.8 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Lipoprotein_18 | 0.54 | 40.0 | 3.62e-01 | 79.0% | 70.4% |
| 3598094 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.54 | 42.0 | 3.37e-01 | 86.4% | 40.6% |
| 3189756 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.54 | 42.0 | 3.53e-01 | 84.0% | 63.3% |
| 4559432 | 331.3.1.8 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Lipoprotein_18 | 0.54 | 39.0 | 3.46e-01 | 79.0% | 68.8% |
| 4393589 | 331.3.1.8 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Lipoprotein_18 | 0.53 | 39.0 | 3.49e-01 | 79.0% | 69.2% |
| None | — | 0.53 | 40.0 | 2.82e-01 | 81.5% | 32.7% | |
| 3632358 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.53 | 41.0 | 3.55e-01 | 84.0% | 57.7% |
| 4054953 | 331.3.1.8 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Lipoprotein_18 | 0.53 | 39.0 | 3.37e-01 | 79.0% | 63.1% |
| 3189408 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.53 | 41.0 | 3.68e-01 | 86.4% | 62.5% |
| 4014734 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.52 | 41.0 | 3.73e-01 | 85.2% | 69.1% |
| 4522129 | 331.3.1.8 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Lipoprotein_18 | 0.52 | 39.0 | 3.48e-01 | 80.2% | 65.8% |
| 3736231 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.52 | 40.0 | 3.52e-01 | 84.0% | 60.0% |
| 3707347 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 30.0 | 3.46e-01 | 75.3% | 81.8% |
| 3168846 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.52 | 41.0 | 3.75e-01 | 86.4% | 70.0% |
| 3393657 | 243.3.1.35 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF229 | 0.52 | 39.0 | 3.44e-01 | 81.5% | 76.0% |
| 3964461 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.52 | 37.0 | 3.33e-01 | 77.8% | 73.3% |
| 3609237 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 44.0 | 2.86e-01 | 98.8% | 46.4% |
| 4399119 | 331.3.1.8 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Lipoprotein_18 | 0.50 | 37.0 | 3.34e-01 | 80.2% | 67.5% |
| 3735914 | 331.3.1.2 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Ring_hydroxyl_A | 0.50 | 37.0 | 2.74e-01 | 79.0% | 40.5% |
D2
medium
residues 82-145
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5jc3A02 | 1.20.1320.30 | Mainly Alpha › Up-down Bundle › phosphoenolpyruvate carboxylase, domain 3 › | 0.61 | 39.0 | 3.10e-01 | 71.9% | 32.5% |
| 1bagA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.53 | 39.0 | 2.47e-01 | 78.1% | 36.3% |
| 2af7D00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.52 | 38.0 | 3.24e-01 | 84.4% | 92.6% |
| 1ia9A02 | 3.20.200.10 | Alpha Beta › Alpha-Beta Barrel › Protein kinase-like fold › MHCK/EF2 kinase | 0.51 | 39.0 | 3.42e-01 | 87.5% | 79.2% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3693368 | 1205.2.1.1 ↗ | a+b two layers › C-terminal domain of CdiA toxin › C-terminal domain of P. aeruginosa CdiA › C-terminal domain of P. aeruginosa CdiA › PF31217 | 0.71 | 62.0 | 5.16e-01 | 98.4% | 80.9% |
| 3257542 | 3998.1.1.1 ↗ | alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 | 0.56 | 40.0 | 3.88e-01 | 79.7% | 66.7% |
| 3178256 | 2003.1.5.114 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_34 | 0.52 | 38.0 | 2.51e-01 | 82.8% | 88.6% |