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SRR1747065_scaffold_5_prodigal-single.1__X__X__00029

Bact-Vir

SRR1747065_scaffold_5_prodigal-single.1__X__X__00029

Identity

Kingdom:
phage

Quality

93.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 67-130
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF17657.7 best DNA_pol3_finger 41.7 1.10e-10 100.0% 38.0%
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2imfA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.55 42.0 3.00e-01 93.8% 26.6%
4gxbA02 1.20.80.60 Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › 0.52 37.0 3.74e-01 87.5% 79.0%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4158759 3584.1.1.1 ↗ alpha arrays › DNA polymerase III finger domain › DNA polymerase III finger domain › DNA polymerase III finger domain › DNA_pol3_finger 0.89 82.0 5.43e-01 100.0% 30.0%
3969382 3584.1.1.0 ↗ alpha arrays › DNA polymerase III finger domain › DNA polymerase III finger domain › DNA polymerase III finger domain 0.86 79.0 5.37e-01 100.0% 30.5%