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SRR1747065_scaffold_5_prodigal-single.1__X__X__00077
Bact-VirSRR1747065_scaffold_5_prodigal-single.1__X__X__00077
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 74-171
Domain cluster:
rep: KY940711.1__ARQ95339.1__X__00107__D8-116
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ia7A00 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.79 | 73.0 | 7.02e-01 | 100.0% | 87.4% |
| 4hrzB00 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.77 | 71.0 | 6.56e-01 | 100.0% | 78.9% |
| 6wimA02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.75 | 49.0 | 5.49e-01 | 85.7% | 86.5% |
| 4k3cA01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.72 | 51.0 | 5.47e-01 | 90.8% | 86.6% |
| 3og5A01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.72 | 50.0 | 5.30e-01 | 88.8% | 82.4% |
| 2qdfA02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.72 | 51.0 | 5.50e-01 | 88.8% | 86.7% |
| 6j09A04 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.72 | 48.0 | 5.34e-01 | 92.9% | 88.3% |
| 6j09A02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.69 | 47.0 | 5.17e-01 | 85.7% | 88.5% |
| 4wyqB00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.65 | 35.0 | 3.91e-01 | 86.7% | 66.7% |
| 1ffvB02 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.65 | 34.0 | 2.98e-01 | 94.9% | 33.8% |
| 1fm2B03 | 2.30.120.10 | Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region | 0.65 | 34.0 | 4.11e-01 | 98.0% | 77.3% |
| 2oryA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.64 | 49.0 | 3.42e-01 | 98.0% | 24.5% |
| 4zohA02 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.62 | 32.0 | 2.92e-01 | 95.9% | 36.1% |
| 2mdrA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.62 | 36.0 | 3.72e-01 | 78.6% | 59.6% |
| 2a8eA00 | 3.30.930.20 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Protein of unknown function DUF1054 | 0.60 | 42.0 | 3.29e-01 | 72.4% | 42.9% |
| 1gesA03 | 3.30.390.30 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.58 | 40.0 | 3.85e-01 | 99.0% | 61.9% |
| 4wksC02 | 2.30.120.10 | Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region | 0.58 | 32.0 | 3.68e-01 | 96.9% | 72.0% |
| 4yfbC02 | 2.30.120.10 | Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region | 0.58 | 33.0 | 3.71e-01 | 98.0% | 71.8% |
| 1pwkA00 | 3.30.740.10 | Alpha Beta › 2-Layer Sandwich › Protein Inhibitor Of Neuronal Nitric Oxide Synthase › Protein Inhibitor Of Neuronal Nitric Oxide Synthase; | 0.57 | 43.0 | 4.51e-01 | 91.8% | 86.8% |
| 6nvxB02 | 2.30.120.10 | Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region | 0.56 | 32.0 | 3.56e-01 | 98.0% | 71.4% |
| 5cflA02 | 3.40.50.12100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Stimulator of interferon genes protein | 0.55 | 37.0 | 3.26e-01 | 95.9% | 45.6% |
| 5ib9A01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.54 | 39.0 | 2.90e-01 | 78.6% | 44.9% |
| 2wraA00 | 2.60.120.400 | Mainly Beta › Sandwich › Jelly Rolls › Calcium-mediated lectin | 0.53 | 44.0 | 4.18e-01 | 100.0% | 75.4% |
| 3icyA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 40.0 | 3.85e-01 | 91.8% | 70.3% |
| 3rd4B00 | 2.40.50.660 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 29.0 | 3.12e-01 | 99.0% | 61.0% |
| 5ywwA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 42.0 | 3.48e-01 | 89.8% | 79.1% |
| 2og9A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.52 | 34.0 | 3.15e-01 | 79.6% | 50.0% |
| 7qi3A01 | 3.30.2140.20 | Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › | 0.52 | 45.0 | 3.25e-01 | 100.0% | 36.6% |
| 6m36O01 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.51 | 35.0 | 3.62e-01 | 71.4% | 95.8% |
| 6u0m401 | 3.30.1640.10 | Alpha Beta › 2-Layer Sandwich › mini-chromosome maintenance (MCM) complex, chain A, domain 1 › mini-chromosome maintenance (MCM) complex, chain A, domain 1 | 0.51 | 40.0 | 3.91e-01 | 86.7% | 97.2% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3981113 | 283.2.1.1 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 | 0.85 | 76.0 | 7.28e-01 | 100.0% | 84.4% |
| 4888824 | 283.2.1.1 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 | 0.83 | 68.0 | 6.19e-01 | 91.8% | 67.2% |
| 5004672 | 283.2.1.1 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 | 0.82 | 77.0 | 7.13e-01 | 100.0% | 80.8% |
| 3966072 | 283.2.1.1 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 | 0.81 | 74.0 | 7.12e-01 | 100.0% | 87.0% |
| 3948020 | 283.2.1.1 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 | 0.81 | 74.0 | 7.12e-01 | 100.0% | 87.3% |
| 3941521 | 283.2.1.0 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like | 0.78 | 67.0 | 6.39e-01 | 99.0% | 79.6% |
| 3943067 | 283.2.1.1 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 | 0.77 | 69.0 | 6.08e-01 | 100.0% | 67.9% |
| 3947887 | 283.2.1.9 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Sheath_initiator | 0.76 | 65.0 | 6.20e-01 | 99.0% | 78.3% |
| 4988107 | 283.2.1.9 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Sheath_initiator | 0.75 | 66.0 | 6.32e-01 | 100.0% | 83.6% |
| 1145979 | 3121.1.1.4 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_TamA_1 | 0.75 | 53.0 | 5.77e-01 | 88.8% | 88.9% |
| 3966797 | 283.2.1.1 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 | 0.75 | 70.0 | 6.61e-01 | 100.0% | 87.8% |
| 4881206 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.74 | 53.0 | 5.62e-01 | 91.8% | 84.7% |
| 3497652 | 864.1.1.0 ↗ | a+b two layers › DLC › DLC › DLC | 0.69 | 44.0 | 4.67e-01 | 100.0% | 74.1% |
| 3592682 | 864.1.1.0 ↗ | a+b two layers › DLC › DLC › DLC | 0.66 | 48.0 | 5.13e-01 | 89.8% | 87.1% |
| 5072764 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.65 | 34.0 | 4.44e-01 | 89.8% | 100.0% |
| 3212591 | 864.1.1.3 ↗ | a+b two layers › DLC › DLC › DLC › Ground-like | 0.63 | 50.0 | 5.25e-01 | 90.8% | 91.1% |
| 4027054 | 864.1.1.2 ↗ | a+b two layers › DLC › DLC › DLC › Tctex-1 | 0.63 | 54.0 | 5.40e-01 | 91.8% | 99.0% |
| 3990949 | 2498.1.1.6 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M3 | 0.63 | 36.0 | 2.62e-01 | 70.4% | 19.3% |
| 3217700 | 864.1.1.3 ↗ | a+b two layers › DLC › DLC › DLC › Ground-like | 0.63 | 50.0 | 4.79e-01 | 90.8% | 73.6% |
| 3701567 | 864.1.1.1 ↗ | a+b two layers › DLC › DLC › DLC › Dynein_light | 0.61 | 52.0 | 4.96e-01 | 91.8% | 88.7% |
| 3217701 | 864.1.1.3 ↗ | a+b two layers › DLC › DLC › DLC › Ground-like | 0.61 | 48.0 | 5.15e-01 | 88.8% | 97.6% |
| 3239383 | 864.1.1.0 ↗ | a+b two layers › DLC › DLC › DLC | 0.61 | 46.0 | 5.10e-01 | 85.7% | 98.8% |
| 4985869 | 283.2.1.0 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like | 0.60 | 48.0 | 5.03e-01 | 100.0% | 96.6% |
| 3841163 | 3860.1.1.0 ↗ | alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm | 0.60 | 47.0 | 4.90e-01 | 100.0% | 90.0% |
| 3479914 | 864.1.1.0 ↗ | a+b two layers › DLC › DLC › DLC | 0.59 | 44.0 | 4.72e-01 | 91.8% | 91.8% |
| 3608215 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.59 | 40.0 | 3.47e-01 | 85.7% | 43.8% |
| 3239403 | 864.1.1.3 ↗ | a+b two layers › DLC › DLC › DLC › Ground-like | 0.59 | 49.0 | 5.05e-01 | 89.8% | 95.8% |
| 3577090 | 4184.1.1.0 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat | 0.58 | 37.0 | 4.04e-01 | 73.5% | 80.0% |
| 4580935 | 2004.1.1.433 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_23 | 0.54 | 43.0 | 2.75e-01 | 84.7% | 50.7% |
| 3726789 | 2011.1.1.8 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M28 | 0.54 | 42.0 | 2.94e-01 | 84.7% | 44.1% |
| 4256745 | 4292.2.1.0 ↗ | a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain | 0.53 | 39.0 | 3.62e-01 | 85.7% | 58.5% |
| 3616135 | 145.1.1.32 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box_4 | 0.53 | 23.0 | 2.78e-01 | 98.0% | 56.9% |
| 3730215 | 6.1.1.0 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil | 0.52 | 45.0 | 3.77e-01 | 95.9% | 89.4% |
| 3939992 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.52 | 37.0 | 3.62e-01 | 100.0% | 66.4% |
| 5068539 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.51 | 45.0 | 3.79e-01 | 100.0% | 59.4% |
| 3971089 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.51 | 44.0 | 3.52e-01 | 95.9% | 57.0% |
| 3794500 | 4.1.1.287 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5641 | 0.50 | 39.0 | 3.22e-01 | 84.7% | 83.2% |
| 3519363 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 44.0 | 3.94e-01 | 96.9% | 92.6% |
D2
medium
residues 1-73