←Back to structures
SRR1747065_scaffold_5_prodigal-single.1__X__X__00079
Bact-VirSRR1747065_scaffold_5_prodigal-single.1__X__X__00079
Identity
- Kingdom:
- phage
Quality
62.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 136-185
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5axmB00 | 3.30.70.3000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) | 0.66 | 47.0 | 3.11e-01 | 80.0% | 83.3% |
| 1oi2A02 | 3.30.1180.20 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › Dihydroxyacetone kinase; domain 2 | 0.54 | 41.0 | 2.97e-01 | 88.0% | 35.8% |
| 2d42A01 | 2.170.15.10 | Mainly Beta › Beta Complex › Proaerolysin; Chain A, domain 3 › Proaerolysin, chain A, domain 3 | 0.52 | 41.0 | 2.92e-01 | 96.0% | 78.8% |
| 1pvgA01 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.52 | 38.0 | 2.52e-01 | 84.0% | 18.0% |
| 1kgqA02 | 2.160.10.10 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins | 0.51 | 35.0 | 2.61e-01 | 78.0% | 82.9% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4983372 | 304.48.1.20 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Thg1 | 0.74 | 55.0 | 3.46e-01 | 80.0% | 80.0% |
| 3930569 | 384.1.1.8 ↗ | few secondary structure elements › BPTI-like › BPTI-like › BPTI-like › BPTI_nem | 0.65 | 47.0 | 3.91e-01 | 96.0% | 43.3% |
| 3573641 | 384.1.1.8 ↗ | few secondary structure elements › BPTI-like › BPTI-like › BPTI-like › BPTI_nem | 0.63 | 47.0 | 4.09e-01 | 96.0% | 53.2% |
| 3729789 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.62 | 53.0 | 3.09e-01 | 100.0% | 37.5% |
| 3880867 | 2484.1.1.145 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1_7 | 0.62 | 53.0 | 3.13e-01 | 98.0% | 81.2% |
| 4321860 | 304.48.1.17 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B_2 | 0.58 | 41.0 | 2.83e-01 | 100.0% | 20.0% |
| 3328712 | 4964.1.1.0 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I | 0.56 | 41.0 | 2.82e-01 | 100.0% | 19.1% |
| 3240875 | 385.1.1.11 ↗ | few secondary structure elements › Cystine-knot cytokines › Cystine-knot cytokines › Cystine-knot cytokines › IL17 | 0.56 | 46.0 | 3.87e-01 | 100.0% | 77.9% |
| 3581414 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 33.0 | 3.29e-01 | 88.0% | 52.7% |
| 3509752 | 219.1.1.50 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH_1 | 0.54 | 44.0 | 2.69e-01 | 90.0% | 46.8% |
| 3941746 | 301.13.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain › Dak1 | 0.54 | 41.0 | 2.93e-01 | 88.0% | 33.1% |
| 5078099 | 304.51.1.7 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR_Cas6 | 0.54 | 37.0 | 2.73e-01 | 74.0% | 62.5% |
| 3404995 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.54 | 39.0 | 2.44e-01 | 84.0% | 58.9% |
| 5072330 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.53 | 36.0 | 3.36e-01 | 90.0% | 50.0% |
| 3601924 | 511.1.1.0 ↗ | beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain | 0.53 | 44.0 | 3.09e-01 | 98.0% | 39.4% |
| 4943803 | 2007.1.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like | 0.52 | 43.0 | 2.75e-01 | 96.0% | 26.7% |
| 5071164 | 210.1.2.1 ↗ | a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › Penicil_amidase | 0.52 | 41.0 | 2.35e-01 | 100.0% | 87.8% |
| 3577252 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 31.0 | 2.47e-01 | 88.0% | 22.7% |
| 3940044 | 385.1.1.0 ↗ | few secondary structure elements › Cystine-knot cytokines › Cystine-knot cytokines › Cystine-knot cytokines | 0.52 | 39.0 | 3.63e-01 | 90.0% | 62.9% |
| 4820404 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.50 | 33.0 | 2.69e-01 | 86.0% | 29.9% |