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SRR1747065_scaffold_5_prodigal-single.1__X__X__00129

Bact-Vir

SRR1747065_scaffold_5_prodigal-single.1__X__X__00129

Identity

Kingdom:
phage

Quality

94.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-62
PDB
Domain cluster: representative
CATH (76)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2cuwA00 3.30.1280.10 Alpha Beta › 2-Layer Sandwich › Mth169; Chain: A , › Phosphoribosylformylglycinamidine synthase subunit PurS 0.83 69.0 6.20e-01 90.2% 100.0%
1t4aA00 3.30.1280.10 Alpha Beta › 2-Layer Sandwich › Mth169; Chain: A , › Phosphoribosylformylglycinamidine synthase subunit PurS 0.77 60.0 5.47e-01 83.6% 100.0%
1vwxS02 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.77 62.0 5.76e-01 88.5% 73.7%
2jxtA01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.72 58.0 5.40e-01 88.5% 73.7%
3egrA00 3.10.20.520 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phenylacetic acid degradation B 0.72 57.0 5.73e-01 90.2% 84.1%
3mfiA04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.71 57.0 4.64e-01 90.2% 54.6%
1mg7A01 3.30.70.1000 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Switch protein XOL-1, GHMP-like 0.70 63.0 4.51e-01 100.0% 81.7%
1jx4A04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.69 54.0 4.73e-01 88.5% 58.2%
6usmB01 3.40.1310.20 Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › 0.69 54.0 4.12e-01 86.9% 85.0%
2hw4A01 3.50.20.20 Alpha Beta › 3-Layer(bba) Sandwich › Pyruvoyl-Dependent Histidine Decarboxylase; Chain B › Janus/Ocnus 0.69 58.0 4.88e-01 98.4% 65.5%
2ipiA02 3.40.462.20 Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › 0.68 54.0 3.63e-01 90.2% 39.1%
4kyzA00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.68 59.0 4.30e-01 98.4% 94.0%
2xskA00 2.60.40.2420 Mainly Beta › Sandwich › Immunoglobulin-like › 0.67 60.0 5.16e-01 100.0% 69.5%
2n59A00 2.60.40.2420 Mainly Beta › Sandwich › Immunoglobulin-like › 0.67 59.0 5.01e-01 100.0% 64.4%
1unnC00 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.66 52.0 4.40e-01 90.2% 49.5%
1qysA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.66 57.0 5.04e-01 98.4% 96.7%
4u7cB04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.66 51.0 4.39e-01 90.2% 60.6%
2v5yA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 57.0 4.88e-01 100.0% 60.8%
3hvnA01 3.90.840.10 Alpha Beta › Alpha-Beta Complex › HIV-1 Reverse Transcriptase; Chain A, domain 3 › Thiol-activated cytolysin superfamily/Thiol-activated cytolysin, alpha-beta domain 0.66 55.0 4.13e-01 100.0% 54.7%
1m55A00 3.40.1310.20 Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › 0.66 51.0 3.64e-01 86.9% 74.1%
7y8sB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 57.0 5.10e-01 100.0% 69.0%
1wv4B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.65 58.0 4.32e-01 100.0% 43.5%
4d8mA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.65 51.0 3.76e-01 88.5% 51.8%
1flmA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.65 57.0 4.55e-01 100.0% 61.5%
5hdwA00 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.65 55.0 4.41e-01 100.0% 56.5%
4ll1C02 2.60.40.640 Mainly Beta › Sandwich › Immunoglobulin-like › 0.64 58.0 4.36e-01 98.4% 56.4%
2i44B00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.64 54.0 3.51e-01 100.0% 35.1%
4eq3A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 57.0 4.71e-01 100.0% 58.3%
1nc7A00 2.60.290.11 Mainly Beta › Sandwich › Hypothetical Protein Tm1070; Chain: A › TM1070-like 0.64 56.0 4.59e-01 100.0% 81.9%
6julA02 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.64 49.0 4.40e-01 90.2% 63.5%
2j3wC00 3.30.450.70 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.63 42.0 3.25e-01 73.8% 30.4%
2eddA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 53.0 4.38e-01 100.0% 51.8%
1dgsA02 3.30.1490.70 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › 0.63 53.0 4.62e-01 96.7% 73.7%
7q61A01 2.60.40.1940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.62 55.0 4.55e-01 100.0% 64.2%
2dbjA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 52.0 4.40e-01 100.0% 55.0%
2rrnA01 3.30.70.2040 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.62 48.0 4.48e-01 90.2% 97.6%
2jvfA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.62 53.0 4.69e-01 100.0% 95.7%
2a2jA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.61 54.0 3.77e-01 100.0% 35.5%
2v3sA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.61 51.0 4.54e-01 100.0% 74.0%
2hzmG01 3.30.310.180 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.61 50.0 4.19e-01 96.7% 96.5%
3vteA03 3.40.462.20 Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › 0.61 47.0 3.44e-01 88.5% 45.9%
4xhyA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.60 53.0 3.93e-01 100.0% 61.5%
6cc0A01 3.30.450.80 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain 0.60 42.0 3.15e-01 73.8% 28.7%
2nytD00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.60 51.0 3.76e-01 100.0% 67.0%
3e0jB00 3.90.1030.20 Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › DNA polymerase delta, p66 (Cdc27) subunit, wHTH domain 0.60 41.0 3.15e-01 88.5% 30.1%
2z3gB00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.60 50.0 4.09e-01 100.0% 59.8%
2qlcA00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.60 50.0 4.11e-01 100.0% 65.9%
6x3aA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 51.0 4.40e-01 100.0% 68.3%
2mraA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.60 51.0 4.20e-01 100.0% 86.3%
3pftA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 51.0 3.86e-01 100.0% 64.1%
4geiA00 2.60.40.640 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 51.0 3.93e-01 100.0% 70.1%
4emeC02 2.30.250.10 Mainly Beta › Roll › Aminopeptidase i, Domain 2 › Aminopeptidase i, Domain 2 0.59 45.0 3.65e-01 88.5% 71.1%
3eipA00 3.10.50.20 Alpha Beta › Roll › Chitinase A; domain 3 › Cloacin immunity protein 0.59 45.0 4.20e-01 90.2% 95.2%
2pjyC00 2.10.60.10 Mainly Beta › Ribbon › CD59 › CD59 0.58 48.0 4.43e-01 93.4% 70.9%
5jpnB04 2.60.120.1540 Mainly Beta › Sandwich › Jelly Rolls › 0.58 47.0 3.76e-01 90.2% 57.9%
5l10B00 3.30.450.80 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain 0.57 39.0 2.93e-01 72.1% 27.6%
3jamD02 3.30.1140.32 Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Ribosomal protein S3, C-terminal domain 0.57 45.0 3.58e-01 90.2% 45.1%
2c4xA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 46.0 3.47e-01 91.8% 59.6%
2furB00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 47.0 3.45e-01 100.0% 41.6%
3ihjA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.57 40.0 2.89e-01 73.8% 60.5%
2hj1A00 3.10.20.280 Alpha Beta › Roll › Ubiquitin-like (UB roll) › RnfH-like 0.57 44.0 4.21e-01 91.8% 74.0%
1vq8B03 3.30.1430.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L3; Chain: B; domain 2, › 0.57 49.0 4.07e-01 100.0% 79.3%
2bvfA03 3.40.462.20 Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › 0.56 49.0 3.42e-01 100.0% 64.3%
4oq8A00 2.60.120.220 Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain 0.56 45.0 3.54e-01 93.4% 59.0%
4h3wA02 2.60.120.1260 Mainly Beta › Sandwich › Jelly Rolls › 0.56 48.0 3.65e-01 98.4% 50.7%
3sonA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.54 44.0 3.49e-01 98.4% 97.9%
3rb5A02 2.60.40.2030 Mainly Beta › Sandwich › Immunoglobulin-like › CalX-beta domain 0.54 47.0 3.75e-01 100.0% 71.2%
3r5dA01 3.30.70.2010 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 40.0 3.35e-01 88.5% 72.1%
1uijB01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 46.0 3.38e-01 100.0% 36.4%
3d0jA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 44.0 3.49e-01 100.0% 43.5%
2iqgA02 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.52 44.0 3.07e-01 100.0% 46.0%
1xdnA02 3.30.470.30 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme 0.52 47.0 3.45e-01 100.0% 80.0%
5chtB00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.52 41.0 2.72e-01 93.4% 36.7%
1y8xB00 3.10.290.20 Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › Ubiquitin-like 2 activating enzyme e1b. Chain: B, domain 3 0.52 45.0 3.95e-01 100.0% 66.3%
5d79A03 3.40.462.20 Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › 0.51 45.0 3.18e-01 100.0% 64.7%
2x5rA01 3.30.470.40 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › 0.50 45.0 3.65e-01 100.0% 64.3%
ECOD (96)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3679515 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.83 58.0 6.64e-01 75.4% 100.0%
119284 3115.2.1.1 a+b two layers › GP2-like › GP2 › GP2 › RNA_pol_inhib 0.80 60.0 6.09e-01 90.2% 81.4%
4846323 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.80 57.0 5.49e-01 100.0% 65.7%
5015713 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.79 63.0 6.37e-01 86.9% 98.3%
3345090 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.78 64.0 5.24e-01 88.5% 51.9%
4013514 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.78 63.0 5.26e-01 88.5% 53.3%
2106285 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.78 63.0 5.20e-01 88.5% 51.9%
3668699 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.78 62.0 5.68e-01 88.5% 66.3%
5012895 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.77 62.0 6.46e-01 88.5% 98.2%
4943401 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.77 63.0 5.61e-01 88.5% 68.2%
2028252 3986.2.1.1 a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd › Dmd 0.77 64.0 6.34e-01 100.0% 87.5%
4967222 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.77 62.0 6.26e-01 88.5% 93.3%
4937773 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.77 62.0 6.37e-01 88.5% 96.6%
5080205 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.77 57.0 6.18e-01 90.2% 96.0%
2527501 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.77 62.0 5.18e-01 88.5% 53.8%
3287357 3115.3.1.0 a+b two layers › GP2-like › P56 › P56 0.77 61.0 6.21e-01 88.5% 100.0%
4007508 3115.6.1.2 a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 0.77 52.0 5.66e-01 88.5% 86.0%
4996552 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.77 62.0 5.53e-01 88.5% 65.9%
2512518 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.76 62.0 5.22e-01 88.5% 55.4%
5000510 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.76 62.0 5.80e-01 88.5% 73.3%
4939739 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.76 61.0 6.22e-01 88.5% 94.9%
5074648 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.76 61.0 5.75e-01 88.5% 74.7%
4990637 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.76 61.0 5.53e-01 88.5% 68.7%
1442393 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.76 61.0 5.04e-01 88.5% 52.3%
4160542 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.76 61.0 6.21e-01 88.5% 96.6%
4951473 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.75 60.0 5.98e-01 88.5% 88.9%
5030993 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.75 61.0 5.56e-01 88.5% 70.0%
5067865 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.75 60.0 5.77e-01 88.5% 80.0%
4969863 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.74 60.0 5.60e-01 88.5% 74.7%
5065436 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.74 59.0 5.88e-01 88.5% 87.5%
3940836 304.8.1.72 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › SCVP 0.74 66.0 5.52e-01 100.0% 99.0%
5081134 3986.2.1.0 a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd 0.74 61.0 6.15e-01 100.0% 93.3%
2831852 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.74 59.0 5.01e-01 88.5% 55.4%
3905094 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.74 58.0 4.56e-01 88.5% 48.1%
3411558 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.74 58.0 4.50e-01 88.5% 48.6%
4983090 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.73 59.0 5.42e-01 88.5% 70.9%
3994984 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.71 58.0 5.77e-01 90.2% 93.8%
3185512 304.6.1.3 a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE 0.71 57.0 3.78e-01 90.2% 36.4%
3216210 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.71 54.0 5.81e-01 88.5% 100.0%
5014684 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.70 55.0 5.68e-01 88.5% 91.4%
5041452 303.1.1.1 a+b four layers › Pyruvoyl-dependent histidine and arginine decarboxylases › Pyruvoyl-dependent histidine and arginine decarboxylases › Pyruvoyl-dependent histidine and arginine decarboxylases › PvlArgDC 0.70 57.0 4.28e-01 90.2% 38.6%
4265395 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.70 55.0 4.53e-01 90.2% 47.0%
3706132 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.70 61.0 5.43e-01 96.7% 98.8%
3281849 303.1.1.3 a+b four layers › Pyruvoyl-dependent histidine and arginine decarboxylases › Pyruvoyl-dependent histidine and arginine decarboxylases › Pyruvoyl-dependent histidine and arginine decarboxylases › DUF4189 0.69 53.0 4.42e-01 90.2% 46.0%
3396683 382.1.1.0 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.68 54.0 4.99e-01 93.4% 68.4%
3867707 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.68 59.0 4.86e-01 100.0% 53.9%
4331814 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.67 52.0 4.36e-01 90.2% 47.0%
4490981 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.67 52.0 4.40e-01 90.2% 49.1%
5001346 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.67 56.0 4.49e-01 100.0% 46.4%
1830951 11.1.1.304 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CsgH 0.67 59.0 5.01e-01 100.0% 64.4%
4146398 223.1.1.7 a+b three layers › Profilin-like › sensor domains › sensor domains › Autoind_bind 0.67 45.0 3.30e-01 70.5% 27.1%
5051952 264.2.1.0 beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.66 52.0 4.33e-01 86.9% 100.0%
5055397 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.66 58.0 4.88e-01 100.0% 61.0%
4179371 1119.1.1.1 a+b complex topology › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › BioW 0.66 52.0 3.51e-01 90.2% 22.0%
4155354 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.66 51.0 4.22e-01 90.2% 45.0%
3734833 304.14.1.0 a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) 0.66 51.0 4.65e-01 90.2% 98.9%
3941935 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.66 52.0 4.35e-01 90.2% 47.8%
3299192 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.66 52.0 4.38e-01 90.2% 52.7%
3266917 862.1.1.1 a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S 0.66 57.0 3.63e-01 100.0% 67.7%
4057352 1119.1.1.1 a+b complex topology › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › BioW 0.66 51.0 3.44e-01 90.2% 21.2%
5044312 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.65 57.0 4.88e-01 100.0% 63.0%
4939155 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.65 52.0 4.28e-01 91.8% 52.9%
5075866 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.65 53.0 4.92e-01 95.1% 100.0%
4946228 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.65 45.0 3.56e-01 73.8% 76.9%
4654177 1119.1.1.1 a+b complex topology › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › BioW 0.65 52.0 3.49e-01 90.2% 22.4%
4300924 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.65 50.0 4.18e-01 90.2% 47.0%
2496895 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 55.0 4.76e-01 100.0% 60.8%
4944975 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 55.0 4.42e-01 100.0% 50.0%
3213931 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.64 51.0 4.08e-01 90.2% 51.5%
4033537 1119.1.1.1 a+b complex topology › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › BioW 0.64 50.0 3.46e-01 90.2% 23.5%
3892842 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.64 50.0 5.00e-01 88.5% 84.6%
4968352 302.4.1.0 a+b two layers › Reverse ferredoxin › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › a+b domain in Acetophenone carboxylase (Apc) alpha subunit 0.64 47.0 4.20e-01 85.2% 55.3%
4472409 223.1.1.7 a+b three layers › Profilin-like › sensor domains › sensor domains › Autoind_bind 0.64 43.0 3.19e-01 72.1% 27.1%
5071112 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.63 54.0 4.17e-01 95.1% 44.4%
5024082 230.4.1.2 a+b two layers › T-fold › ApbE-like › ApbE-like › AbpE_bact 0.62 52.0 4.34e-01 100.0% 55.8%
4219489 304.6.1.3 a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE 0.62 48.0 3.20e-01 88.5% 32.7%
4625721 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.61 47.0 3.97e-01 90.2% 48.3%
3613410 304.11.1.0 a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase 0.61 53.0 4.81e-01 100.0% 98.8%
3483062 221.1.1.116 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ubiquitin_6 0.60 47.0 3.88e-01 90.2% 45.0%
2006900 302.4.1.0 a+b two layers › Reverse ferredoxin › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › a+b domain in Acetophenone carboxylase (Apc) alpha subunit 0.60 44.0 3.88e-01 88.5% 49.0%
4945478 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.60 48.0 3.70e-01 88.5% 62.9%
5070993 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 54.0 4.90e-01 100.0% 76.2%
3271707 11.1.1.60 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Vps26 0.60 53.0 3.90e-01 98.4% 53.5%
3553704 382.1.1.1 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › UPAR_LY6 0.59 49.0 4.33e-01 93.4% 62.2%
3406433 382.1.1.6 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › QVR 0.59 46.0 3.96e-01 93.4% 53.0%
3306922 11.1.1.60 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Vps26 0.58 47.0 3.61e-01 100.0% 58.8%
3900161 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 49.0 3.83e-01 100.0% 42.9%
3929801 221.1.1.6 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA 0.57 49.0 4.32e-01 100.0% 98.9%
3623124 3346.1.1.1 a+b two layers › N-terminal domain in ubiquitin-fold modifier 1 specific protease UfSP2 › N-terminal domain in ubiquitin-fold modifier 1 specific protease UfSP2 › N-terminal domain in ubiquitin-fold modifier 1 specific protease UfSP2 › UfSP2_N 0.57 43.0 3.02e-01 98.4% 23.6%
4928258 304.5.1.0 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.57 47.0 4.33e-01 98.4% 100.0%
3218957 221.1.1.6 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA 0.56 48.0 4.00e-01 100.0% 81.7%
4955225 210.1.3.3 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 0.56 46.0 3.18e-01 100.0% 68.6%
5024227 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.56 45.0 4.46e-01 90.2% 90.5%
4410522 223.1.1.7 a+b three layers › Profilin-like › sensor domains › sensor domains › Autoind_bind 0.55 38.0 2.89e-01 73.8% 83.0%
3548439 11.1.1.41 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C 0.55 48.0 3.57e-01 98.4% 54.8%
5066749 210.1.3.5 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.55 44.0 3.11e-01 100.0% 33.1%