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SRR1747065_scaffold_5_prodigal-single.1__X__X__00169
Bact-VirSRR1747065_scaffold_5_prodigal-single.1__X__X__00169
Identity
- Kingdom:
- phage
Quality
74.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 89-161
Domain cluster:
rep: MN445185.1__QKN85958.1__ACEC001_1200__00122__D6-72
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1um8A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.93 | 88.0 | 5.94e-01 | 100.0% | 37.0% |
| 1g41A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.87 | 77.0 | 5.50e-01 | 100.0% | 35.8% |
| 3m6aA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.84 | 67.0 | 5.14e-01 | 100.0% | 40.7% |
| 1r6bX04 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.82 | 68.0 | 4.82e-01 | 100.0% | 32.5% |
| 2qf9A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.72 | 51.0 | 3.93e-01 | 74.0% | 41.7% |
| 1uruA01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.62 | 45.0 | 3.32e-01 | 79.5% | 78.0% |
| 1z90B01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.60 | 42.0 | 2.68e-01 | 79.5% | 15.6% |
| 3natA01 | 3.40.50.11250 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Protein of unknown function DUF3013 | 0.55 | 40.0 | 3.19e-01 | 76.7% | 79.6% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4093256 | 2004.1.1.545 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM, AAA_2, AAA_5 | 0.97 | 92.0 | 5.92e-01 | 100.0% | 26.8% |
| None | — | 0.96 | 88.0 | 5.53e-01 | 100.0% | 23.0% | |
| 4247371 | 2004.1.1.669 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mg_chelatase, AAA_2 | 0.96 | 92.0 | 5.96e-01 | 100.0% | 28.9% |
| 4554144 | 2004.1.1.441 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM, AAA_2 | 0.96 | 88.0 | 5.73e-01 | 100.0% | 26.4% |
| None | — | 0.95 | 92.0 | 5.95e-01 | 100.0% | 28.3% | |
| 3364572 | 2004.1.1.154 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_2,AAA_5 | 0.95 | 92.0 | 5.74e-01 | 100.0% | 27.3% |
| None | — | 0.95 | 92.0 | 5.75e-01 | 100.0% | 24.6% | |
| None | — | 0.94 | 90.0 | 5.87e-01 | 100.0% | 28.5% | |
| 2724427 | 2004.1.1.441 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM, AAA_2 | 0.87 | 77.0 | 6.47e-01 | 100.0% | 60.0% |
| 2642909 | 2004.1.1.258 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA,AAA_2 | 0.86 | 76.0 | 5.72e-01 | 100.0% | 42.3% |
| 2034195 | 2004.1.1.153 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_2 | 0.86 | 76.0 | 6.41e-01 | 100.0% | 59.5% |
| 3927319 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.66 | 49.0 | 4.38e-01 | 78.1% | 64.0% |
| 3203670 | 601.1.2.48 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › SSXT | 0.63 | 51.0 | 4.67e-01 | 87.7% | 69.5% |
| 3482274 | 142.1.1.5 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › SRI | 0.57 | 44.0 | 3.63e-01 | 83.6% | 89.2% |