←Back to structures
SRR1747065_scaffold_5_prodigal-single.1__X__X__00244
Bact-VirSRR1747065_scaffold_5_prodigal-single.1__X__X__00244
Identity
- Kingdom:
- phage
Quality
83.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-89
Domain cluster:
representative
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4nkbA01 | 3.30.1120.120 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.70 | 62.0 | 5.44e-01 | 97.5% | 78.9% |
| 7x7zA01 | 2.40.480.10 | Mainly Beta › Beta Barrel › AOC barrel-like › Allene oxide cyclase-like | 0.65 | 58.0 | 4.83e-01 | 98.7% | 90.6% |
| 3dxoB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.64 | 44.0 | 3.87e-01 | 70.9% | 48.7% |
| 4mjdA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 43.0 | 3.80e-01 | 73.4% | 49.6% |
| 3tthB00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.61 | 54.0 | 4.32e-01 | 100.0% | 68.9% |
| 2nykA01 | 3.30.500.30 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › | 0.61 | 43.0 | 3.58e-01 | 100.0% | 40.5% |
| 1zs8A01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.60 | 48.0 | 3.77e-01 | 98.7% | 40.4% |
| 4ghbA00 | 2.40.160.190 | Mainly Beta › Beta Barrel › Porin › | 0.60 | 52.0 | 3.71e-01 | 98.7% | 48.2% |
| 3hdjA01 | 3.30.1780.10 | Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 | 0.60 | 49.0 | 4.15e-01 | 93.7% | 67.9% |
| 1lrzA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.59 | 49.0 | 4.15e-01 | 94.9% | 70.6% |
| 3bk5A00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.59 | 52.0 | 3.76e-01 | 100.0% | 36.6% |
| 1ufhA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.59 | 52.0 | 4.17e-01 | 98.7% | 77.4% |
| 6bbtB01 | 2.60.40.3050 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 45.0 | 3.74e-01 | 83.5% | 78.6% |
| 1xe4A01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.58 | 47.0 | 3.79e-01 | 91.1% | 60.4% |
| 3sluB01 | 3.10.450.350 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 41.0 | 4.00e-01 | 75.9% | 97.8% |
| 5cxoB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 39.0 | 3.39e-01 | 72.2% | 47.8% |
| 1u17A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.57 | 49.0 | 3.81e-01 | 98.7% | 54.6% |
| 1dymA00 | 2.70.100.10 | Mainly Beta › Distorted Sandwich › 1,4-Beta-D-Glucan Cellobiohydrolase I; Chain A › Glycoside hydrolase, family 7, domain | 0.57 | 50.0 | 3.14e-01 | 96.2% | 69.0% |
| 4h89A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.57 | 49.0 | 3.94e-01 | 100.0% | 68.5% |
| 3tdgA01 | 3.10.450.520 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 36.0 | 3.93e-01 | 92.4% | 78.8% |
| 2fsrA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.56 | 50.0 | 3.92e-01 | 100.0% | 65.5% |
| 3n7zA02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.56 | 48.0 | 3.88e-01 | 96.2% | 61.1% |
| 3lodA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.55 | 48.0 | 4.01e-01 | 100.0% | 66.9% |
| 1vhsA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.55 | 47.0 | 3.81e-01 | 98.7% | 68.5% |
| 2jlmA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.55 | 47.0 | 3.72e-01 | 100.0% | 65.0% |
| 2cy2A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.55 | 46.0 | 3.66e-01 | 97.5% | 68.4% |
| 1iicA02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 47.0 | 3.38e-01 | 100.0% | 54.4% |
| 1vkcA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 46.0 | 3.94e-01 | 100.0% | 82.7% |
| 4jxqA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 46.0 | 3.64e-01 | 100.0% | 61.4% |
| 1l3aA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.53 | 44.0 | 3.65e-01 | 100.0% | 82.5% |
| 7bysA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.53 | 42.0 | 2.97e-01 | 92.4% | 79.3% |
| 2ft0A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.53 | 45.0 | 3.36e-01 | 98.7% | 48.6% |
| 1x53A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 44.0 | 3.79e-01 | 96.2% | 59.5% |
| 3gy9A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 45.0 | 3.71e-01 | 98.7% | 70.9% |
| 4rs2A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 44.0 | 3.51e-01 | 100.0% | 58.3% |
| 3d8pB00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 44.0 | 3.61e-01 | 98.7% | 67.5% |
ECOD (45)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3939966 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.69 | 61.0 | 5.47e-01 | 97.5% | 86.4% |
| 3634062 | 844.1.1.4 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Scramblase | 0.69 | 61.0 | 4.35e-01 | 100.0% | 92.7% |
| 3454372 | 4210.1.1.0 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain | 0.68 | 47.0 | 4.37e-01 | 72.2% | 57.0% |
| 5038973 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.67 | 50.0 | 3.19e-01 | 78.5% | 27.4% |
| 3912012 | 844.1.1.4 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Scramblase | 0.66 | 58.0 | 4.40e-01 | 100.0% | 98.5% |
| 3225830 | 844.1.1.4 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Scramblase | 0.65 | 58.0 | 4.34e-01 | 100.0% | 96.5% |
| 2701923 | 243.3.1.6 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Monellin | 0.65 | 52.0 | 4.88e-01 | 87.3% | 92.9% |
| 3920826 | 844.1.1.4 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Scramblase | 0.63 | 56.0 | 4.41e-01 | 100.0% | 61.8% |
| 3827447 | 844.1.1.2 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR | 0.63 | 55.0 | 4.18e-01 | 100.0% | 95.9% |
| 3953309 | 213.1.1.25 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_3 | 0.63 | 56.0 | 4.33e-01 | 100.0% | 66.3% |
| 4199183 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.62 | 52.0 | 4.36e-01 | 96.2% | 63.4% |
| None | — | 0.62 | 55.0 | 4.44e-01 | 100.0% | 78.1% | |
| 3402554 | 632.7.1.64 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › Med15_C | 0.62 | 51.0 | 4.60e-01 | 92.4% | 79.1% |
| 3458155 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.61 | 52.0 | 3.49e-01 | 93.7% | 38.0% |
| 5038844 | 330.2.1.0 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) | 0.61 | 42.0 | 4.28e-01 | 84.8% | 72.5% |
| 3550298 | 331.3.1.6 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PRELI | 0.61 | 54.0 | 4.15e-01 | 100.0% | 76.7% |
| 156548 | 844.1.1.1 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Tub | 0.61 | 52.0 | 3.67e-01 | 100.0% | 89.0% |
| 4034202 | 213.1.1.7 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › FemAB | 0.61 | 50.0 | 4.09e-01 | 94.9% | 63.1% |
| 4945543 | 4018.1.1.5 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › FBPase_C | 0.60 | 47.0 | 3.77e-01 | 86.1% | 90.0% |
| 4959370 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.60 | 51.0 | 4.05e-01 | 96.2% | 75.0% |
| 5082955 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.59 | 48.0 | 4.02e-01 | 91.1% | 100.0% |
| 4942634 | 3111.1.1.0 ↗ | beta barrels › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain | 0.59 | 51.0 | 4.70e-01 | 100.0% | 94.3% |
| 3947165 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.59 | 50.0 | 4.14e-01 | 98.7% | 51.3% |
| 4014367 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.58 | 50.0 | 3.92e-01 | 97.5% | 75.4% |
| 3259296 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.58 | 47.0 | 3.85e-01 | 100.0% | 47.3% |
| 3972141 | 881.1.1.25 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DUF4946 | 0.58 | 49.0 | 3.95e-01 | 94.9% | 93.5% |
| 4494959 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.57 | 49.0 | 4.11e-01 | 96.2% | 76.4% |
| 1606363 | 3953.1.1.3 ↗ | a+b two layers › Csd3 N-terminal domain › Csd3 N-terminal domain › Csd3 N-terminal domain › NMB0315_dom_I | 0.57 | 44.0 | 4.21e-01 | 84.8% | 96.7% |
| 3218638 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.56 | 46.0 | 4.02e-01 | 94.9% | 77.7% |
| 3607434 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.55 | 48.0 | 4.07e-01 | 98.7% | 91.9% |
| 2448551 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.55 | 48.0 | 4.21e-01 | 97.5% | 66.4% |
| 4949019 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.55 | 47.0 | 3.33e-01 | 100.0% | 38.7% |
| 3743711 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.54 | 46.0 | 3.79e-01 | 98.7% | 70.3% |
| 11072 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.54 | 46.0 | 3.86e-01 | 100.0% | 77.2% |
| 3446490 | 5.1.3.68 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1618 | 0.53 | 42.0 | 2.79e-01 | 89.9% | 46.9% |
| 1716885 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.53 | 46.0 | 3.85e-01 | 100.0% | 71.6% |
| 3617390 | 213.1.1.37 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_18 | 0.53 | 46.0 | 3.65e-01 | 100.0% | 53.7% |
| 4927763 | 213.1.1.29 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_9 | 0.53 | 44.0 | 3.55e-01 | 96.2% | 64.7% |
| None | — | 0.52 | 45.0 | 3.63e-01 | 100.0% | 69.1% | |
| 3651277 | 2484.1.1.67 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 | 0.52 | 41.0 | 3.37e-01 | 89.9% | 99.4% |
| 3952307 | 213.1.1.31 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_10 | 0.52 | 44.0 | 3.66e-01 | 100.0% | 69.0% |
| 3302604 | 2484.1.1.67 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 | 0.52 | 43.0 | 3.42e-01 | 100.0% | 43.5% |
| 3830941 | 2484.1.1.67 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 | 0.51 | 43.0 | 3.54e-01 | 100.0% | 48.4% |
| 1153941 | 243.4.1.2 ↗ | a+b two layers › Cystatin-like › DsbC/DsbG N-terminal domain-like › DsbC/DsbG N-terminal domain-like › DsbG_N | 0.51 | 36.0 | 3.46e-01 | 75.9% | 70.8% |
| 3804102 | 2484.1.1.67 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 | 0.51 | 43.0 | 3.50e-01 | 100.0% | 48.1% |