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SRR1747065_scaffold_9_prodigal-single.1__X__X__00010
Bact-VirSRR1747065_scaffold_9_prodigal-single.1__X__X__00010
Identity
- Kingdom:
- phage
Quality
57.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 210-274
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kp8A00 | 1.20.5.170 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.71 | 53.0 | 5.14e-01 | 80.0% | 79.2% |
| 6vg5A00 | 1.10.10.930 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.55 | 43.0 | 4.05e-01 | 86.2% | 79.0% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3377749 | 3843.1.1.15 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › ETR1_N | 0.77 | 59.0 | 5.04e-01 | 81.5% | 83.0% |
| 3196783 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.76 | 56.0 | 5.65e-01 | 78.5% | 83.1% |
| 3198319 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.72 | 56.0 | 3.50e-01 | 83.1% | 17.0% |
| 3204035 | 1.1.17.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Peptidase_S64 | 0.70 | 54.0 | 3.42e-01 | 84.6% | 16.5% |
| 3802720 | 630.1.1.1 ↗ | a+b complex topology › RuBisCo LSMT C-terminal, substrate-binding domain › RuBisCo LSMT C-terminal, substrate-binding domain › RuBisCo LSMT C-terminal, substrate-binding domain › Rubis-subs-bind | 0.68 | 51.0 | 3.82e-01 | 84.6% | 31.2% |
| 4528712 | 109.4.1.3083 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF29810 | 0.67 | 49.0 | 3.29e-01 | 80.0% | 19.6% |
| 3803325 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.66 | 56.0 | 4.70e-01 | 93.8% | 95.5% |
| 3294636 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.63 | 51.0 | 4.11e-01 | 84.6% | 49.6% |
| 5030459 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.61 | 46.0 | 3.06e-01 | 83.1% | 19.7% |