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SRR1747065_scaffold_9_prodigal-single.1__X__X__00028
Bact-VirSRR1747065_scaffold_9_prodigal-single.1__X__X__00028
Identity
- Kingdom:
- phage
Quality
80.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-48
D2
high
residues 55-200
Domain cluster:
rep: gwf2_scaffold_96_prodigal-single.1__X__X__00137__D4-158
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ov9C01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.63 | 34.0 | 3.47e-01 | 71.2% | 51.7% |
| 3ci0I00 | 3.30.1300.30 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like | 0.60 | 28.0 | 3.61e-01 | 93.8% | 75.9% |
| 4rmmA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.59 | 33.0 | 3.43e-01 | 71.9% | 56.3% |
| 6r3wA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.57 | 41.0 | 3.96e-01 | 72.6% | 91.9% |
| 3ia8A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.56 | 41.0 | 4.01e-01 | 75.3% | 93.8% |
| 2x45A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.56 | 43.0 | 4.35e-01 | 87.7% | 81.2% |
| 1jmxA02 | 2.40.128.120 | Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 | 0.55 | 38.0 | 4.30e-01 | 82.9% | 95.4% |
| 1u17A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.53 | 43.0 | 4.03e-01 | 87.0% | 80.0% |
| 4e1sA00 | 2.40.160.160 | Mainly Beta › Beta Barrel › Porin › Inverse autotransporter, beta-domain | 0.52 | 43.0 | 3.67e-01 | 89.0% | 93.4% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3500806 | 9.2.1.2 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › Vac_ImportDeg | 0.62 | 45.0 | 4.24e-01 | 76.0% | 96.1% |
| 3789459 | 9.2.1.2 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › Vac_ImportDeg | 0.58 | 43.0 | 4.07e-01 | 76.7% | 93.9% |
| 3317211 | 844.1.1.2 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR | 0.58 | 40.0 | 3.73e-01 | 70.5% | 89.4% |
| 3394789 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 34.0 | 3.89e-01 | 82.9% | 77.3% |
| 4343588 | 9.1.1.2 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Nitrophorin | 0.58 | 45.0 | 4.11e-01 | 81.5% | 85.8% |
| 3839234 | 5090.1.1.0 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains | 0.58 | 40.0 | 4.62e-01 | 71.9% | 98.1% |
| 3636503 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.56 | 29.0 | 3.91e-01 | 73.3% | 100.0% |
| 3786518 | 4.8.1.18 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Myosin_N | 0.56 | 27.0 | 3.72e-01 | 70.5% | 98.5% |
| 4015592 | 9.2.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin | 0.54 | 44.0 | 4.05e-01 | 87.0% | 92.7% |
| 2516764 | 71.1.1.4 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › MucB_RseB | 0.54 | 47.0 | 4.37e-01 | 93.8% | 87.0% |
| 858 | 9.3.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Qn_am_d_aII | 0.54 | 37.0 | 4.05e-01 | 72.6% | 85.7% |
| 4057965 | 9.1.1.12 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › THAP4_heme-bd | 0.54 | 40.0 | 3.62e-01 | 78.1% | 98.5% |
| 5012521 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.53 | 44.0 | 3.84e-01 | 90.4% | 87.2% |
| 3824851 | 5084.5.1.43 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › PF30985 | 0.53 | 38.0 | 3.72e-01 | 74.0% | 100.0% |
| 3065351 | 9.3.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like | 0.53 | 39.0 | 4.13e-01 | 76.0% | 95.3% |
| 4069560 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 29.0 | 3.69e-01 | 81.5% | 100.0% |
| 4241745 | 883.1.1.8 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › Grp7_allergen | 0.51 | 43.0 | 3.97e-01 | 91.8% | 82.1% |