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SRR1747065_scaffold_9_prodigal-single.1__X__X__00038
Bact-VirSRR1747065_scaffold_9_prodigal-single.1__X__X__00038
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 45-151
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ce8A00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 43.0 | 4.61e-01 | 71.0% | 89.9% |
| 6yiiA01 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.60 | 48.0 | 3.80e-01 | 88.8% | 80.8% |
| 2memA00 | 3.90.1150.190 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › SLED domain | 0.56 | 40.0 | 3.92e-01 | 88.8% | 67.2% |
| 2kdoA03 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 36.0 | 4.02e-01 | 72.9% | 88.7% |
| 2cq0A00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.55 | 43.0 | 4.40e-01 | 85.0% | 91.3% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3969045 | 3585.1.1.1 ↗ | a+b two layers › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain › DNA_pol_IIIA_C | 0.72 | 49.0 | 5.53e-01 | 71.0% | 95.2% |
| 4318785 | 3585.1.1.0 ↗ | a+b two layers › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain | 0.72 | 48.0 | 5.68e-01 | 76.6% | 100.0% |
| 4400628 | 3585.1.1.1 ↗ | a+b two layers › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain › DNA_pol_IIIA_C | 0.72 | 49.0 | 5.62e-01 | 71.0% | 100.0% |
| 1308296 | 3585.1.1.0 ↗ | a+b two layers › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain | 0.69 | 47.0 | 5.06e-01 | 72.9% | 80.6% |
| 4972520 | 304.24.1.6 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › SBDS_C | 0.67 | 43.0 | 5.05e-01 | 70.1% | 94.5% |
| 4982291 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.67 | 41.0 | 4.71e-01 | 71.0% | 82.5% |
| 3489893 | 304.24.1.6 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › SBDS_C | 0.67 | 44.0 | 4.91e-01 | 71.0% | 88.7% |
| 3243593 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.61 | 49.0 | 4.99e-01 | 88.8% | 95.2% |
| 1288499 | 110.3.1.1 ↗ | alpha arrays › DEATH domain › SLED domain › SLED domain › SLED | 0.56 | 40.0 | 3.92e-01 | 88.8% | 67.2% |
| 5059796 | 4326.1.1.0 ↗ | a+b two layers › ERH-like › ERH-like › ERH-like | 0.54 | 34.0 | 3.98e-01 | 88.8% | 97.1% |
| 3490940 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.54 | 40.0 | 3.74e-01 | 79.4% | 91.4% |
| 3195934 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.54 | 40.0 | 3.69e-01 | 79.4% | 89.7% |
| 3574591 | 2485.1.1.43 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_6 | 0.53 | 41.0 | 4.25e-01 | 95.3% | 88.0% |
| 3698249 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.53 | 40.0 | 2.72e-01 | 100.0% | 20.5% |
| 3480553 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.53 | 40.0 | 3.71e-01 | 80.4% | 91.4% |
| 5024508 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.52 | 38.0 | 3.42e-01 | 76.6% | 69.7% |
| 4435772 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.52 | 37.0 | 3.55e-01 | 72.9% | 100.0% |
| 3865040 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.51 | 39.0 | 2.97e-01 | 81.3% | 94.8% |
| 3345575 | 2485.1.1.34 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Rdx | 0.50 | 35.0 | 3.96e-01 | 89.7% | 96.2% |