←Back to structures
SRR1747065_scaffold_9_prodigal-single.1__X__X__00057
Bact-VirSRR1747065_scaffold_9_prodigal-single.1__X__X__00057
Identity
- Kingdom:
- phage
Quality
46.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 322-436
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03382.21 best | DUF285 | 42.4 | 7.70e-11 | 96.5% | 89.2% |
CATH (45)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1fs2A00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.73 | 65.0 | 5.04e-01 | 100.0% | 45.6% |
| 2z63A00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.72 | 65.0 | 4.13e-01 | 100.0% | 24.2% |
| 3e2jA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.72 | 65.0 | 5.65e-01 | 100.0% | 92.0% |
| 4arnA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.70 | 63.0 | 4.75e-01 | 100.0% | 50.9% |
| 1io0A00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.67 | 60.0 | 5.33e-01 | 100.0% | 76.5% |
| 3m6iA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.64 | 45.0 | 4.20e-01 | 72.2% | 90.1% |
| 1e3jA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.64 | 44.0 | 4.17e-01 | 71.3% | 90.6% |
| 1lluA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.60 | 42.0 | 4.00e-01 | 72.2% | 87.7% |
| 1gcuA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.59 | 41.0 | 3.82e-01 | 71.3% | 79.9% |
| 6o15A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.59 | 42.0 | 4.20e-01 | 73.9% | 100.0% |
| 3oa3A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.59 | 47.0 | 3.69e-01 | 87.0% | 53.0% |
| 1z6aA01 | 3.40.50.10810 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tandem AAA-ATPase domain | 0.58 | 47.0 | 3.91e-01 | 87.0% | 57.8% |
| 6ie0A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.58 | 40.0 | 3.90e-01 | 71.3% | 91.0% |
| 2cf5A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.58 | 41.0 | 3.71e-01 | 72.2% | 75.8% |
| 2p2sA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.58 | 40.0 | 3.84e-01 | 71.3% | 86.9% |
| 3pi7A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.57 | 41.0 | 3.82e-01 | 73.9% | 85.7% |
| 3eqzB00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 40.0 | 3.98e-01 | 73.0% | 84.0% |
| 3ldhA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.57 | 40.0 | 3.66e-01 | 73.9% | 89.5% |
| 3e18A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.57 | 40.0 | 3.78e-01 | 72.2% | 86.8% |
| 2eklA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 40.0 | 3.98e-01 | 73.9% | 87.6% |
| 7dz9A01 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.56 | 47.0 | 3.69e-01 | 94.8% | 65.9% |
| 3vkhA08 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 38.0 | 2.79e-01 | 71.3% | 39.6% |
| 2iqtA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.55 | 47.0 | 3.59e-01 | 97.4% | 49.8% |
| 7esrA01 | 3.40.800.10 | Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Ureohydrolase domain | 0.55 | 44.0 | 3.14e-01 | 87.0% | 48.9% |
| 2im5A00 | 3.20.140.10 | Alpha Beta › Alpha-Beta Barrel › nicotinate phosphoribosyltransferase › nicotinate phosphoribosyltransferase | 0.55 | 42.0 | 3.03e-01 | 85.2% | 64.3% |
| 8ebtA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 43.0 | 3.81e-01 | 87.0% | 71.5% |
| 5kiaA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 41.0 | 3.97e-01 | 87.0% | 69.4% |
| 1dqwA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.54 | 43.0 | 3.39e-01 | 87.8% | 44.2% |
| 2hxvA02 | 3.40.430.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A | 0.54 | 43.0 | 3.67e-01 | 99.1% | 50.5% |
| 2acfB00 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.54 | 42.0 | 3.72e-01 | 83.5% | 80.3% |
| 1xhcA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.54 | 36.0 | 3.60e-01 | 84.3% | 65.3% |
| 4wv3B01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.54 | 44.0 | 3.08e-01 | 90.4% | 83.3% |
| 1vliA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.54 | 43.0 | 3.27e-01 | 87.0% | 44.0% |
| 1gq6B00 | 3.40.800.10 | Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Ureohydrolase domain | 0.52 | 46.0 | 3.49e-01 | 100.0% | 61.5% |
| 2oqhA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.52 | 45.0 | 3.64e-01 | 100.0% | 64.2% |
| 1dxeA00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.52 | 41.0 | 3.28e-01 | 87.0% | 50.2% |
| 2yw3E00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.52 | 40.0 | 3.39e-01 | 87.0% | 47.5% |
| 2a5yC01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 42.0 | 3.58e-01 | 86.1% | 92.9% |
| 4tv5A00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.51 | 42.0 | 3.37e-01 | 91.3% | 58.8% |
| 2wqpA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.51 | 45.0 | 3.50e-01 | 100.0% | 53.9% |
| 6jimB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 40.0 | 3.71e-01 | 82.6% | 71.3% |
| 4zemA02 | 3.40.50.10470 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Translation initiation factor eif-2b; domain 2 | 0.51 | 37.0 | 3.29e-01 | 75.7% | 92.9% |
| 1vr6A02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.50 | 44.0 | 3.43e-01 | 99.1% | 48.1% |
| 3e82B01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.50 | 40.0 | 3.75e-01 | 87.0% | 96.6% |
| 2xbuA00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.50 | 36.0 | 3.11e-01 | 76.5% | 72.0% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3552317 | 207.1.1.257 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_8, LRR_11 | 0.76 | 70.0 | 4.28e-01 | 100.0% | 21.6% |
| 3780845 | 207.1.1.134 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_6, DUF7885 | 0.76 | 69.0 | 5.15e-01 | 100.0% | 54.3% |
| 3929361 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.74 | 60.0 | 4.81e-01 | 87.0% | 75.1% |
| 3782127 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.73 | 67.0 | 4.84e-01 | 100.0% | 43.2% |
| 4002233 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.73 | 64.0 | 4.21e-01 | 100.0% | 22.6% |
| 3574665 | 207.1.1.116 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_FBXL15 | 0.72 | 65.0 | 4.29e-01 | 100.0% | 24.0% |
| 3225598 | 207.1.1.130 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_8 | 0.72 | 65.0 | 4.13e-01 | 100.0% | 27.5% |
| 3650818 | 207.1.1.134 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_6, DUF7885 | 0.71 | 64.0 | 5.05e-01 | 100.0% | 50.4% |
| 3437828 | 207.1.1.79 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box | 0.71 | 65.0 | 4.55e-01 | 100.0% | 44.8% |
| 3921820 | 207.1.1.55 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 | 0.71 | 61.0 | 5.08e-01 | 100.0% | 54.9% |
| 3176655 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.71 | 64.0 | 4.49e-01 | 100.0% | 31.9% |
| 4830812 | 207.1.1.24 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_8 | 0.71 | 64.0 | 5.54e-01 | 100.0% | 76.8% |
| 3219500 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.70 | 63.0 | 4.59e-01 | 100.0% | 45.6% |
| 3660800 | 207.1.1.133 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_14 | 0.70 | 61.0 | 4.72e-01 | 100.0% | 42.3% |
| 3460407 | 207.1.1.99 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_At5g56370 | 0.69 | 63.0 | 5.06e-01 | 100.0% | 60.9% |
| 3660539 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.69 | 62.0 | 4.57e-01 | 100.0% | 44.5% |
| 3741384 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.69 | 62.0 | 4.44e-01 | 100.0% | 40.6% |
| 3488825 | 207.1.1.98 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_NXF1-5 | 0.69 | 61.0 | 5.37e-01 | 98.3% | 87.1% |
| 3421413 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.68 | 52.0 | 5.48e-01 | 85.2% | 91.0% |
| 3924841 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.68 | 61.0 | 4.83e-01 | 100.0% | 65.7% |
| 3382180 | 207.1.1.230 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › WHD_ROQ1 | 0.68 | 62.0 | 5.11e-01 | 100.0% | 60.5% |
| 3354356 | 207.1.1.43 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_3 | 0.68 | 62.0 | 4.37e-01 | 100.0% | 44.3% |
| 3419084 | 207.1.1.280 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_13, LRR_14 | 0.68 | 61.0 | 4.79e-01 | 100.0% | 54.3% |
| 3619564 | 207.1.1.116 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_FBXL15 | 0.68 | 59.0 | 4.66e-01 | 100.0% | 45.2% |
| 3240324 | 2484.1.1.200 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH | 0.66 | 54.0 | 4.73e-01 | 88.7% | 92.6% |
| 3259345 | 207.1.1.12 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP | 0.65 | 58.0 | 3.92e-01 | 100.0% | 32.1% |
| 3577219 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.65 | 58.0 | 4.76e-01 | 100.0% | 58.1% |
| None | — | 0.61 | 43.0 | 3.76e-01 | 72.2% | 72.6% | |
| 4021184 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.59 | 41.0 | 3.62e-01 | 73.0% | 71.7% |
| 5025445 | 2004.1.1.239 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SLFN-g3_helicase | 0.58 | 41.0 | 3.38e-01 | 73.0% | 54.4% |
| 3698512 | 2004.1.1.23 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom | 0.58 | 47.0 | 3.51e-01 | 89.6% | 43.5% |
| 5029006 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.58 | 37.0 | 3.66e-01 | 82.6% | 59.2% |
| 3621546 | 2004.1.1.829 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C, ResIII, ERCC3_RAD25_C | 0.57 | 46.0 | 3.11e-01 | 87.8% | 39.6% |
| 999004 | 2003.1.1.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ADH_zinc_N | 0.57 | 40.0 | 3.55e-01 | 73.0% | 71.6% |
| 4002786 | 7562.1.1.1 ↗ | a/b three-layered sandwiches › Thiamin pyrophosphokinase, catalytic domain › Thiamin pyrophosphokinase, catalytic domain › Thiamin pyrophosphokinase, catalytic domain › TPK_catalytic | 0.57 | 39.0 | 3.58e-01 | 93.9% | 52.3% |
| 3185851 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.57 | 46.0 | 2.95e-01 | 88.7% | 30.9% |
| 3210633 | 2004.1.1.120 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII | 0.56 | 45.0 | 3.34e-01 | 87.8% | 57.2% |
| 2092590 | 2004.1.1.205 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_30 | 0.56 | 43.0 | 3.50e-01 | 80.0% | 59.6% |
| 3443063 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.54 | 44.0 | 3.82e-01 | 87.8% | 88.9% |
| 5064885 | 2004.1.1.120 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII | 0.54 | 43.0 | 3.40e-01 | 86.1% | 41.3% |
| 3167619 | 7573.1.1.1 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran | 0.54 | 39.0 | 3.24e-01 | 76.5% | 73.0% |
| 3810278 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.51 | 43.0 | 2.89e-01 | 94.8% | 66.1% |