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SRR1747065_scaffold_9_prodigal-single.1__X__X__00090

Bact-Vir

SRR1747065_scaffold_9_prodigal-single.1__X__X__00090

Identity

Kingdom:
phage

Quality

92.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-45_96-224
PDB
CATH (83)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2p11A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.75 59.0 6.41e-01 81.0% 98.6%
3q3eA03 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.72 58.0 5.62e-01 83.3% 81.2%
5enzA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.72 56.0 5.80e-01 81.0% 87.0%
1o6cB01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.71 56.0 5.18e-01 81.6% 95.4%
3m1yC01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.71 55.0 5.97e-01 80.5% 100.0%
1obbA00 3.90.1820.10 Alpha Beta › Alpha-Beta Complex › LDH C-terminal domain-like › AglA-like glucosidase 0.71 55.0 3.97e-01 81.0% 83.1%
2ybdA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.71 56.0 6.17e-01 83.9% 100.0%
4w4tB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.71 56.0 4.29e-01 83.3% 65.0%
3dv9A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.70 64.0 6.49e-01 96.0% 99.4%
7ec2A01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.70 53.0 5.70e-01 83.3% 90.7%
3kzvA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.70 53.0 4.67e-01 78.7% 91.6%
1u8xX01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.69 48.0 4.91e-01 70.7% 100.0%
3fefA00 3.90.1820.10 Alpha Beta › Alpha-Beta Complex › LDH C-terminal domain-like › AglA-like glucosidase 0.68 54.0 3.97e-01 81.6% 84.8%
4as2A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.68 58.0 5.33e-01 90.2% 98.7%
8hi4A03 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.67 47.0 4.45e-01 70.7% 95.1%
3wdmD00 3.40.50.12640 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphopantoate/pantothenate synthetase 0.67 58.0 5.11e-01 93.7% 66.3%
1iirA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.66 51.0 4.74e-01 80.5% 100.0%
4uulA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.66 46.0 4.93e-01 71.3% 100.0%
2qytA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.66 51.0 4.99e-01 79.9% 94.6%
2hqbA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.65 43.0 4.91e-01 79.9% 88.5%
1snyA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.65 51.0 4.50e-01 81.6% 93.1%
3tnjA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.64 44.0 5.16e-01 73.6% 99.2%
3or5A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.64 43.0 4.67e-01 81.0% 81.4%
4q9dA02 3.40.50.1220 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain 0.63 51.0 5.30e-01 92.5% 91.4%
4bguA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.63 44.0 4.79e-01 70.1% 100.0%
3ragB00 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.63 50.0 4.60e-01 83.3% 99.1%
1jvbA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.62 47.0 5.16e-01 84.5% 95.7%
1ozhA02 3.40.50.1220 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain 0.62 50.0 5.28e-01 93.1% 96.8%
2h6eA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.62 47.0 5.13e-01 86.8% 95.8%
3k9cB01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.62 42.0 4.79e-01 81.6% 91.6%
2pgnA02 3.40.50.1220 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain 0.62 51.0 5.02e-01 92.5% 83.0%
2ihtA02 3.40.50.1220 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain 0.62 51.0 5.29e-01 93.1% 94.5%
4f3nA00 3.40.50.12710 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.61 50.0 3.93e-01 86.8% 78.6%
1ovmA02 3.40.50.1220 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain 0.61 50.0 5.30e-01 94.3% 96.2%
4wqmA03 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.61 44.0 5.02e-01 74.7% 99.2%
7jt8I01 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.61 47.0 4.31e-01 81.0% 89.2%
4nzpA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.61 42.0 4.72e-01 77.6% 89.1%
3knzA02 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.61 47.0 5.04e-01 93.7% 95.2%
2vz9A05 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.61 53.0 4.61e-01 93.7% 96.6%
1jqdA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.61 50.0 4.26e-01 87.9% 88.1%
3jyoA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.60 45.0 4.93e-01 86.2% 94.4%
3loqA02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.60 43.0 4.92e-01 75.3% 98.4%
1tq8A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.60 42.0 4.82e-01 81.6% 97.6%
2iuyA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.60 47.0 4.71e-01 81.0% 82.4%
2yvaA00 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.60 52.0 5.04e-01 93.7% 89.1%
4tkzA00 3.40.50.510 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component 0.60 37.0 4.19e-01 81.0% 81.5%
3lkdA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.59 50.0 4.26e-01 89.7% 84.4%
4j3fA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.59 54.0 4.70e-01 97.7% 91.1%
6xl1A01 3.40.50.10770 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Hypothetical protein VC1899 like domain (Restriction endonuclease-like) 0.59 43.0 4.53e-01 74.1% 91.0%
5hfjC00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.59 46.0 4.37e-01 81.0% 94.6%
1t90A01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.59 49.0 4.15e-01 100.0% 54.6%
4obxA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.59 48.0 4.40e-01 87.4% 88.5%
1xngA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.59 45.0 4.08e-01 81.6% 98.4%
5nnnA02 3.40.50.1370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase 0.58 49.0 5.16e-01 93.1% 98.7%
1o9gA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 50.0 4.73e-01 92.0% 93.7%
2f8lA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 50.0 4.52e-01 93.1% 92.9%
1pdoA00 3.40.50.510 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component 0.58 36.0 4.15e-01 80.5% 83.7%
7zvjA01 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.58 42.0 3.77e-01 75.3% 91.6%
1foaA01 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.58 42.0 3.96e-01 75.3% 98.6%
5aunB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 42.0 3.87e-01 74.1% 87.4%
4pioA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.57 47.0 4.70e-01 87.4% 89.0%
3gdwB00 3.40.50.510 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component 0.57 37.0 4.14e-01 82.2% 81.9%
7cpxA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.57 49.0 3.97e-01 92.0% 99.1%
2a3nA02 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.57 45.0 4.64e-01 94.3% 87.6%
2wteA01 3.40.50.11700 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 42.0 4.61e-01 75.3% 94.9%
3fxaA00 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.57 47.0 4.61e-01 94.3% 80.6%
4gicA01 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.56 38.0 4.14e-01 73.0% 82.6%
3htxD03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.56 46.0 4.31e-01 87.4% 86.0%
1eamA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 48.0 4.09e-01 93.7% 88.8%
1vmiA01 3.40.50.10950 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.55 50.0 5.08e-01 99.4% 98.3%
3s6gY01 3.40.1160.10 Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like 0.55 49.0 4.29e-01 97.1% 93.1%
6i3mE02 3.40.50.10470 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Translation initiation factor eif-2b; domain 2 0.55 45.0 4.36e-01 87.4% 92.0%
1zzgA02 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.55 46.0 4.67e-01 93.7% 92.3%
2z1dA01 3.40.50.11750 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HypD, alpha/beta domain 1 0.54 36.0 3.90e-01 98.3% 80.1%
5uqiA00 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.53 44.0 4.29e-01 93.7% 81.4%
5ybwA01 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.52 41.0 3.76e-01 82.2% 94.8%
3iprA00 3.40.50.510 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component 0.51 34.0 3.71e-01 85.1% 82.5%
2amlB01 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.51 42.0 4.01e-01 93.7% 72.3%
1npdB01 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.51 35.0 3.89e-01 80.5% 87.0%
1eluA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.51 44.0 3.84e-01 93.1% 62.9%
4s1wB01 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.51 42.0 4.09e-01 94.3% 79.2%
3dwgA01 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 39.0 3.79e-01 79.9% 99.0%
5x4kA01 3.90.1640.30 Alpha Beta › Alpha-Beta Complex › inorganic pyrophosphatase (n-terminal core) › 0.50 40.0 3.96e-01 90.2% 77.8%
ECOD (93)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3945878 7512.1.1.3 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.76 59.0 5.65e-01 81.0% 79.0%
3387973 2006.1.1.2 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.75 62.0 6.66e-01 93.7% 100.0%
4251732 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.75 59.0 5.52e-01 81.6% 74.3%
4527266 2003.1.1.58 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_4 0.73 58.0 4.56e-01 83.3% 75.7%
5027791 7512.1.1.3 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.72 56.0 5.33e-01 81.0% 73.7%
4078373 7512.1.1.16 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Capsule_synth 0.72 55.0 5.58e-01 81.6% 80.0%
4018631 2003.1.1.3 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short 0.71 55.0 4.60e-01 79.9% 85.2%
3896439 2006.1.1.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.71 59.0 5.91e-01 85.6% 92.0%
3634107 2006.1.1.2 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.71 61.0 6.26e-01 90.8% 96.5%
4034025 7512.1.1.8 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Epimerase_2 0.71 55.0 5.21e-01 81.0% 96.1%
3955007 2003.1.1.3 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short 0.70 55.0 4.54e-01 81.0% 87.3%
5073689 5073.1.1.11 alpha bundles › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain M › Cation_ATPase_C 0.70 65.0 4.52e-01 98.9% 47.4%
4310954 7512.1.1.8 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Epimerase_2 0.69 54.0 5.06e-01 81.6% 93.3%
4024269 7512.1.1.54 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Alg14 0.69 49.0 5.01e-01 73.0% 91.8%
4981003 7512.1.1.32 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_trans_1_4 0.69 52.0 5.21e-01 81.0% 77.1%
5072215 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.69 54.0 5.01e-01 81.6% 98.1%
5057830 7512.1.1.3 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.68 52.0 5.15e-01 82.8% 76.1%
2625400 7512.1.1.3 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.68 53.0 4.94e-01 81.0% 72.3%
4996912 7512.1.1.3 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.68 53.0 5.13e-01 81.6% 75.4%
4939405 2003.1.4.4 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › PPS_PS 0.67 59.0 5.15e-01 93.1% 67.5%
1290527 2003.1.4.4 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › PPS_PS 0.67 59.0 5.17e-01 93.7% 68.0%
4994803 7512.1.1.3 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.67 52.0 5.00e-01 81.0% 72.5%
4987832 7512.1.1.3 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.67 52.0 5.09e-01 81.0% 75.7%
3941420 7512.1.1.3 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.66 51.0 5.29e-01 80.5% 85.5%
4572718 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.66 49.0 4.17e-01 76.4% 97.1%
5038196 7512.1.1.32 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_trans_1_4 0.66 52.0 4.93e-01 81.0% 73.5%
4933886 7512.1.1.3 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.66 53.0 5.21e-01 83.3% 78.4%
5056794 7512.1.1.3 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.66 51.0 5.16e-01 81.0% 81.2%
4990082 7512.1.1.2 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Phosphorylase 0.66 54.0 4.88e-01 85.6% 81.7%
3960389 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.65 48.0 4.86e-01 74.1% 82.9%
5038514 7512.1.1.3 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.65 50.0 4.56e-01 81.0% 59.6%
4118581 2003.1.1.2 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Ldh_1_N 0.65 46.0 4.95e-01 71.3% 100.0%
4395481 7564.1.1.1 a/b three-layered sandwiches › Homo-oligomeric flavin-containing Cys decarboxylases, HFCD › Homo-oligomeric flavin-containing Cys decarboxylases, HFCD › Homo-oligomeric flavin-containing Cys decarboxylases, HFCD › Flavoprotein 0.65 50.0 4.88e-01 79.9% 94.2%
4988052 2007.2.2.0 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphotyrosine protein phosphatases I-like 0.65 36.0 4.66e-01 83.9% 95.0%
3328508 2003.1.5.31 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GRAS 0.63 52.0 3.98e-01 87.4% 69.0%
4964371 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.63 53.0 4.44e-01 88.5% 94.5%
3694264 2003.1.1.11 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › 3Beta_HSD 0.62 57.0 4.33e-01 98.3% 64.9%
4948534 236.1.1.1 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N 0.62 41.0 3.43e-01 90.2% 40.1%
3254988 7514.1.1.1 a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_1 0.61 46.0 5.01e-01 78.7% 100.0%
3911061 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.61 53.0 4.40e-01 93.7% 95.1%
4052456 2007.6.1.5 a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › bact-PGI_C 0.61 42.0 4.40e-01 93.7% 78.1%
3378278 2003.1.5.31 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GRAS 0.60 50.0 3.77e-01 87.4% 72.3%
3752916 2003.1.5.67 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_12 0.60 53.0 4.51e-01 95.4% 98.6%
3590924 2010.1.1.3 a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain › EIIA-man 0.60 38.0 4.29e-01 82.2% 81.5%
None 0.60 53.0 4.99e-01 95.4% 98.1%
4383106 2003.1.5.67 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_12 0.60 50.0 4.32e-01 89.1% 70.5%
4602324 2003.1.5.82 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 0.59 49.0 4.44e-01 87.4% 82.1%
2717225 7592.1.1.8 a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF_Card1 0.59 43.0 4.52e-01 75.3% 89.4%
4051226 2007.6.1.5 a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › bact-PGI_C 0.59 42.0 4.36e-01 94.3% 77.5%
4972541 2010.1.1.3 a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain › EIIA-man 0.59 37.0 4.12e-01 81.0% 79.3%
1548119 2003.1.5.22 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_Mtase 0.59 50.0 4.54e-01 91.4% 92.4%
4022902 2003.1.5.79 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23 0.59 49.0 3.99e-01 87.4% 73.5%
4175938 2003.1.5.71 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_33 0.59 48.0 3.92e-01 87.4% 80.6%
3982826 2010.1.1.3 a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain › EIIA-man 0.59 37.0 4.05e-01 81.0% 77.1%
3989133 2010.1.1.3 a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain › EIIA-man 0.58 38.0 4.13e-01 82.2% 77.9%
3774119 2003.1.5.35 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › LCM 0.58 50.0 4.04e-01 92.0% 77.6%
None 0.58 49.0 4.19e-01 89.1% 88.7%
3738575 2003.1.5.71 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_33 0.58 49.0 4.00e-01 89.7% 81.9%
4453324 2005.1.1.11 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.58 48.0 4.32e-01 89.1% 76.3%
3928319 2003.1.5.66 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.58 48.0 4.36e-01 87.4% 76.5%
3268663 2003.1.5.82 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 0.58 48.0 4.49e-01 87.4% 82.9%
4955707 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.58 41.0 4.69e-01 73.0% 100.0%
4309091 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.58 48.0 4.81e-01 88.5% 85.6%
4234668 2005.1.1.11 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.57 48.0 4.36e-01 89.1% 75.7%
4635446 2005.1.1.11 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.57 47.0 4.34e-01 89.1% 75.7%
4167294 2005.1.1.11 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.57 48.0 4.28e-01 90.8% 72.0%
4958370 2007.1.14.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like 0.57 46.0 4.69e-01 98.3% 89.1%
3726688 2003.1.1.29 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › OCD_Mu_crystall 0.57 48.0 4.36e-01 92.0% 94.2%
2531092 7516.1.1.6 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_8 0.57 42.0 3.57e-01 75.9% 75.7%
4499405 2005.1.1.11 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.57 48.0 4.28e-01 90.8% 70.6%
5052342 7594.1.1.1 a/b three-layered sandwiches › Hydrogenase expression/formation protein HypD › Hydrogenase expression/formation protein HypD › Hydrogenase expression/formation protein HypD › HypD 0.56 38.0 3.63e-01 98.3% 57.6%
3590102 2005.1.1.11 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.56 47.0 4.23e-01 89.1% 72.5%
5066233 2005.1.1.11 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.56 47.0 4.05e-01 90.2% 65.7%
3926237 2007.1.2.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.56 41.0 3.75e-01 75.3% 98.3%
3781959 2003.1.7.2 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NagB/RpiA/CoA transferase-like › IF-2B 0.56 46.0 4.01e-01 87.4% 95.2%
3596551 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.56 49.0 4.75e-01 92.5% 84.7%
3978164 2010.1.1.3 a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain › EIIA-man 0.56 35.0 3.85e-01 83.3% 77.8%
4450533 2005.1.1.11 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.56 47.0 4.00e-01 90.8% 63.1%
3718471 2003.1.1.5 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ADH_zinc_N 0.56 48.0 4.67e-01 92.5% 82.6%
3989136 2005.1.1.11 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.56 46.0 4.31e-01 89.7% 75.0%
5053787 2003.1.5.66 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.56 49.0 4.32e-01 93.7% 87.8%
5026605 2007.6.1.5 a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › bact-PGI_C 0.55 42.0 4.31e-01 95.4% 82.4%
4954825 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.54 45.0 4.08e-01 89.1% 70.8%
5079164 7516.1.1.2 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.54 39.0 3.34e-01 74.7% 65.4%
4277733 2007.1.12.2 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Type II 3-dehydroquinate dehydratase › Exonuc_VII_L 0.54 41.0 3.97e-01 87.4% 70.3%
3519448 7534.1.1.0 a/b three-layered sandwiches › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase 0.53 46.0 4.70e-01 100.0% 96.5%
4927892 7516.1.1.2 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.52 39.0 3.07e-01 76.4% 61.2%
4145378 2005.1.1.11 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.52 45.0 4.11e-01 92.5% 78.3%
3626877 7516.1.1.52 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotid_trans 0.52 38.0 2.99e-01 75.3% 57.3%
4491518 7516.1.1.153 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2, Glyco_transf_8 0.52 40.0 2.84e-01 80.5% 46.1%
4308956 2007.1.7.2 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Rossmann-like domain in dehydroquinate synthase-like enzymes › DHQ_synthase 0.52 42.0 4.30e-01 85.6% 99.4%
4948508 2005.1.1.18 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase 0.51 43.0 4.47e-01 91.4% 99.4%
3343829 2003.1.5.59 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › rRNA_methylase 0.51 40.0 4.29e-01 92.0% 100.0%
D2 medium residues 49-93
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5tt5A05 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.72 61.0 5.23e-01 100.0% 84.4%
3h95A01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.60 49.0 3.55e-01 93.3% 88.5%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4176415 102.1.1.81 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2+HHH_5 0.72 60.0 4.05e-01 97.8% 34.4%
4370137 102.1.1.96 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH, DNA_ligase_ZBD, HHH_2, HHH_5 0.71 59.0 4.03e-01 100.0% 36.1%
4173803 102.1.1.24 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2 0.71 58.0 4.94e-01 97.8% 80.0%
4169402 102.1.1.10 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD,HHH_2 0.70 57.0 3.77e-01 97.8% 35.2%
4091625 102.1.1.10 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD,HHH_2 0.70 57.0 3.92e-01 97.8% 35.6%
3955589 2003.1.5.35 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › LCM 0.66 47.0 2.92e-01 77.8% 77.7%
3965865 6056.1.1.2 alpha arrays › SP1917-like › SP1917-like › SP1917-like › PrmC_N 0.61 53.0 4.17e-01 100.0% 49.5%
4064663 6056.1.1.2 alpha arrays › SP1917-like › SP1917-like › SP1917-like › PrmC_N 0.60 53.0 4.10e-01 100.0% 46.0%
3615281 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.51 42.0 2.49e-01 97.8% 81.0%
3170552 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.51 44.0 2.54e-01 97.8% 16.9%