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SRR1747065_scaffold_9_prodigal-single.1__X__X__00119
Bact-VirSRR1747065_scaffold_9_prodigal-single.1__X__X__00119
Identity
- Kingdom:
- phage
Quality
69.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-125
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3vz9B00 | 3.30.457.50 | Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › Chromosome segregation protein Spc25 | 0.56 | 28.0 | 2.97e-01 | 79.1% | 50.5% |
| 2kcmA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 30.0 | 3.66e-01 | 98.3% | 83.8% |
| 2e6mA00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.53 | 39.0 | 3.38e-01 | 77.4% | 69.9% |
| 1rvjH02 | 3.90.50.10 | Alpha Beta › Alpha-Beta Complex › Photosynthetic Reaction Center; Chain H, domain 2 › Photosynthetic Reaction Center, subunit H, domain 2 | 0.53 | 39.0 | 3.73e-01 | 95.7% | 65.9% |
| 3d0fA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 32.0 | 3.81e-01 | 100.0% | 93.2% |
| 7c9rH01 | 3.90.50.10 | Alpha Beta › Alpha-Beta Complex › Photosynthetic Reaction Center; Chain H, domain 2 › Photosynthetic Reaction Center, subunit H, domain 2 | 0.52 | 38.0 | 3.46e-01 | 93.0% | 57.4% |
| 3e8mA00 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.51 | 37.0 | 3.36e-01 | 75.7% | 87.2% |
| 4ktbA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.51 | 39.0 | 3.55e-01 | 82.6% | 86.3% |
| 4navA00 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.51 | 37.0 | 3.28e-01 | 77.4% | 80.1% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5035835 | 4.6.1.0 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain | 0.74 | 30.0 | 4.06e-01 | 98.3% | 71.7% |
| 3955873 | 4.6.1.0 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain | 0.69 | 32.0 | 3.99e-01 | 95.7% | 71.4% |
| 4928523 | 4.6.1.0 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain | 0.68 | 28.0 | 3.97e-01 | 95.7% | 77.6% |
| 3279082 | 4.6.1.2 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC | 0.67 | 33.0 | 4.03e-01 | 94.8% | 72.0% |
| 4954382 | 2006.1.4.50 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › DUF3368 | 0.56 | 41.0 | 3.66e-01 | 77.4% | 82.9% |
| 5036295 | 377.1.1.6 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_L24e | 0.50 | 19.0 | 2.76e-01 | 85.2% | 72.7% |