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SRR1747065_scaffold_9_prodigal-single.1__X__X__00216
Bact-VirSRR1747065_scaffold_9_prodigal-single.1__X__X__00216
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-144
Domain cluster:
rep: IMGVR_UViG_7000000171_000112-7000000171-SRS052697_LANL_scaffold_75554__gene_171382__D9-163
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13274.12 best | SocA_Panacea | 52.3 | 1.60e-13 | 66.2% | 99.1% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3wwxA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.54 | 41.0 | 3.15e-01 | 78.9% | 69.4% |
| 7tqrA01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.54 | 38.0 | 3.50e-01 | 72.5% | 66.1% |
| 3q9oA02 | 3.90.1350.10 | Alpha Beta › Alpha-Beta Complex › Exotoxin A, middle domain › Exotoxin A, middle domain | 0.53 | 31.0 | 3.00e-01 | 78.2% | 47.9% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3964088 | 101.1.2.269 ↗ | alpha arrays › HTH › HTH › winged helix domain › SocA_Panacea | 0.83 | 77.0 | 7.02e-01 | 98.6% | 90.0% |
| 4940657 | 101.1.2.269 ↗ | alpha arrays › HTH › HTH › winged helix domain › SocA_Panacea | 0.81 | 76.0 | 7.25e-01 | 100.0% | 93.9% |
| 5031700 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.79 | 69.0 | 6.42e-01 | 93.0% | 85.1% |
| 4943285 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 62.0 | 6.37e-01 | 88.0% | 98.5% |
| 4996617 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 61.0 | 6.39e-01 | 93.7% | 99.2% |
| 4968451 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 55.0 | 5.73e-01 | 83.1% | 96.9% |
| 5006976 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 57.0 | 5.45e-01 | 99.3% | 100.0% |
| 5051709 | 4019.1.1.1 ↗ | alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase | 0.53 | 41.0 | 3.15e-01 | 82.4% | 69.9% |