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SRR1747065_scaffold_9_prodigal-single.1__X__X__00230
Bact-VirSRR1747065_scaffold_9_prodigal-single.1__X__X__00230
Identity
- Kingdom:
- phage
Quality
71.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-94
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3d3rA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 38.0 | 4.01e-01 | 77.4% | 56.6% |
| 3aqqA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.71 | 45.0 | 4.48e-01 | 98.9% | 60.6% |
| 2qcpX01 | 2.40.50.320 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Copper binding periplasmic protein CusF | 0.71 | 47.0 | 5.20e-01 | 100.0% | 85.3% |
| 2k5nA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.70 | 43.0 | 4.77e-01 | 98.9% | 78.4% |
| 1v43A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.67 | 36.0 | 4.20e-01 | 79.6% | 75.0% |
| 2awnC03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.66 | 36.0 | 4.38e-01 | 75.3% | 84.5% |
| 4mtnA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.65 | 41.0 | 4.81e-01 | 98.9% | 95.2% |
| 2asbA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 44.0 | 4.75e-01 | 98.9% | 89.3% |
| 2wfwB02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 37.0 | 4.24e-01 | 81.7% | 82.1% |
| 2bh8B01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 35.0 | 4.32e-01 | 77.4% | 96.4% |
| 3anuA01 | 2.40.37.20 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › D-serine dehydratase-like domain | 0.59 | 42.0 | 3.68e-01 | 75.3% | 53.5% |
| 3amuA02 | 2.40.50.1010 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.59 | 39.0 | 3.53e-01 | 100.0% | 47.1% |
| 2w8eA00 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.57 | 44.0 | 3.41e-01 | 81.7% | 80.8% |
| 3pqiA01 | 2.40.50.230 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Gp5 N-terminal domain | 0.56 | 43.0 | 4.58e-01 | 96.8% | 92.7% |
| 3csqA02 | 2.70.70.10 | Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) | 0.54 | 48.0 | 3.97e-01 | 97.8% | 59.1% |
| 1smxA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 41.0 | 4.23e-01 | 98.9% | 87.4% |
| 4he6A00 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.53 | 38.0 | 3.94e-01 | 76.3% | 93.3% |
| 3x27A01 | 2.40.100.20 | Mainly Beta › Beta Barrel › Cyclophilin › | 0.52 | 38.0 | 3.28e-01 | 76.3% | 70.3% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3212056 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.77 | 50.0 | 5.39e-01 | 100.0% | 77.5% |
| 4964594 | 2.1.1.378 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF26006 | 0.70 | 47.0 | 5.03e-01 | 100.0% | 80.0% |
| 3969528 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 44.0 | 4.95e-01 | 98.9% | 85.7% |
| 3629129 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.67 | 47.0 | 5.02e-01 | 98.9% | 85.0% |
| 3575571 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.66 | 45.0 | 4.67e-01 | 98.9% | 76.5% |
| 3703907 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.66 | 41.0 | 4.72e-01 | 98.9% | 89.2% |
| 3589665 | 2.1.1.3 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CSD | 0.65 | 42.0 | 4.59e-01 | 98.9% | 80.0% |
| 4095704 | 2.1.1.272 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF28196 | 0.64 | 43.0 | 4.36e-01 | 84.9% | 70.0% |
| 3628127 | 2.1.1.3 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CSD | 0.63 | 44.0 | 4.04e-01 | 98.9% | 55.8% |
| 3612838 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.63 | 44.0 | 4.51e-01 | 98.9% | 74.4% |
| 4484212 | 2.1.1.100 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM_2 | 0.62 | 41.0 | 4.31e-01 | 98.9% | 74.7% |
| 3244963 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.62 | 46.0 | 4.57e-01 | 100.0% | 75.8% |
| 3700732 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 43.0 | 4.28e-01 | 98.9% | 70.5% |
| 3256930 | 1.1.7.32 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › D-ser_dehydrat | 0.60 | 44.0 | 3.92e-01 | 76.3% | 68.5% |
| 4984616 | 1.1.7.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Fucose_iso_C | 0.60 | 44.0 | 3.87e-01 | 77.4% | 82.7% |
| 1681129 | 3975.1.1.1 ↗ | a+b two layers › uncharacterized protein lpg1496 N-terminal domain › uncharacterized protein lpg1496 N-terminal domain › uncharacterized protein lpg1496 N-terminal domain › lpg1496_N | 0.59 | 42.0 | 3.73e-01 | 73.1% | 99.3% |
| 3611062 | 2.1.1.3 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CSD | 0.57 | 44.0 | 4.17e-01 | 98.9% | 68.8% |
| 4995609 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.56 | 42.0 | 3.70e-01 | 100.0% | 51.7% |
| 4342812 | 1.1.7.32 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › D-ser_dehydrat | 0.56 | 40.0 | 3.54e-01 | 76.3% | 66.4% |
| 3212563 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 42.0 | 4.20e-01 | 100.0% | 81.1% |
| 4985560 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.55 | 40.0 | 4.17e-01 | 76.3% | 96.5% |
| 3606926 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 45.0 | 3.99e-01 | 98.9% | 61.5% |
| 4932882 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.54 | 37.0 | 3.34e-01 | 71.0% | 98.5% |
| 3708593 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 46.0 | 4.26e-01 | 96.8% | 73.0% |
| 4373119 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.54 | 39.0 | 4.00e-01 | 76.3% | 92.2% |
| 3612837 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 47.0 | 4.29e-01 | 98.9% | 84.8% |
| 3262589 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 43.0 | 3.96e-01 | 100.0% | 69.2% |
| 3934267 | 213.1.1.5 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › MOZ_SAS | 0.51 | 44.0 | 3.85e-01 | 95.7% | 77.1% |
| 4596341 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.50 | 37.0 | 3.77e-01 | 78.5% | 86.3% |