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SRR1747065_scaffold_9_prodigal-single.1__X__X__00256
Bact-VirSRR1747065_scaffold_9_prodigal-single.1__X__X__00256
Identity
- Kingdom:
- phage
Quality
56.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-258
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01966.29 best | HD | 29.6 | 1.00e-06 | 39.8% | 76.7% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3aqlA02 | 1.10.3090.10 | Mainly Alpha › Orthogonal Bundle › cca-adding enzyme, domain 2 › cca-adding enzyme, domain 2 | 0.58 | 29.0 | 3.01e-01 | 99.2% | 47.6% |
| 1n81A00 | 1.10.3030.10 | Mainly Alpha › Orthogonal Bundle › Gametocyte protein Pfg27 › Gametocyte protein Pfg27 | 0.58 | 31.0 | 3.55e-01 | 100.0% | 67.7% |
| 3p5nA00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.55 | 28.0 | 3.35e-01 | 83.6% | 70.8% |
| 2pv4A00 | 1.10.3440.10 | Mainly Alpha › Orthogonal Bundle › Sama2622-like fold › Sama2622-like | 0.55 | 25.0 | 3.19e-01 | 85.9% | 70.3% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4883028 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.78 | 62.0 | 6.88e-01 | 100.0% | 99.5% |
| 5036791 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.73 | 59.0 | 6.30e-01 | 100.0% | 93.5% |
| 4889143 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.72 | 62.0 | 6.59e-01 | 100.0% | 98.7% |
| 3952919 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.67 | 63.0 | 6.37e-01 | 99.6% | 98.8% |
| 4217922 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.65 | 32.0 | 3.55e-01 | 79.3% | 57.1% |
| 5017733 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.65 | 52.0 | 5.67e-01 | 97.7% | 98.6% |
| 4984350 | 604.39.1.0 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters | 0.54 | 27.0 | 3.48e-01 | 84.0% | 81.3% |
D2
high
residues 263-367
D3
medium
residues 612-676
D4
medium
residues 677-732