←Back to structures
SRR1747065_scaffold_9_prodigal-single.1__X__X__00294
Bact-VirSRR1747065_scaffold_9_prodigal-single.1__X__X__00294
Identity
- Kingdom:
- phage
Quality
89.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 41-187
Domain cluster:
rep: SRR1747022_scaffold_43_prodigal-single.1__X__X__00239__D35-210
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00395.26 best | SLH | 19.7 | 9.20e-04 | 19.7% | 52.3% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1bhdA00 | 1.10.418.10 | Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Calponin-like domain | 0.57 | 39.0 | 4.38e-01 | 100.0% | 92.6% |
| 4txiA03 | 1.10.418.10 | Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Calponin-like domain | 0.57 | 38.0 | 4.36e-01 | 100.0% | 95.1% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4419547 | 193.3.1.1 ↗ | alpha bundles › CH domain-like › Surface-layer homology (SLH) domains › Surface-layer homology (SLH) domains › SLH | 0.84 | 76.0 | 6.56e-01 | 93.9% | 76.2% |
| 2390863 | 193.3.1.1 ↗ | alpha bundles › CH domain-like › Surface-layer homology (SLH) domains › Surface-layer homology (SLH) domains › SLH | 0.84 | 80.0 | 7.52e-01 | 100.0% | 93.0% |
| 4392152 | 193.3.1.1 ↗ | alpha bundles › CH domain-like › Surface-layer homology (SLH) domains › Surface-layer homology (SLH) domains › SLH | 0.83 | 80.0 | 7.36e-01 | 100.0% | 92.2% |
| 4525080 | 193.3.1.1 ↗ | alpha bundles › CH domain-like › Surface-layer homology (SLH) domains › Surface-layer homology (SLH) domains › SLH | 0.83 | 80.0 | 7.28e-01 | 100.0% | 82.7% |
| 4182872 | 193.3.1.1 ↗ | alpha bundles › CH domain-like › Surface-layer homology (SLH) domains › Surface-layer homology (SLH) domains › SLH | 0.82 | 79.0 | 7.33e-01 | 100.0% | 86.9% |
| 4480896 | 193.3.1.1 ↗ | alpha bundles › CH domain-like › Surface-layer homology (SLH) domains › Surface-layer homology (SLH) domains › SLH | 0.81 | 78.0 | 7.18e-01 | 100.0% | 93.9% |
D2
medium
residues 201-351
Domain cluster:
rep: SRR1747044_scaffold_0_prodigal-single.1__X__X__00253__D8-187
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07737.18 best | ATLF | 49.9 | 4.60e-13 | 94.7% | 56.0% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1pwuA04 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.83 | 79.0 | 6.79e-01 | 100.0% | 86.0% |
| 1j7nA01 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.74 | 68.0 | 5.92e-01 | 98.7% | 92.3% |
| 4jixB00 | 3.30.2010.10 | Alpha Beta › 2-Layer Sandwich › Zincin-like › "Metalloproteases (""zincins""), catalytic domain" | 0.63 | 39.0 | 4.56e-01 | 84.1% | 87.5% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4951424 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.79 | 75.0 | 6.80e-01 | 100.0% | 80.5% |
| 4991382 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.63 | 49.0 | 4.71e-01 | 82.1% | 71.2% |
| 3959623 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.63 | 51.0 | 5.36e-01 | 84.8% | 99.3% |
| 4261757 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.62 | 57.0 | 4.80e-01 | 100.0% | 76.4% |
| 5012980 | 2498.1.1.9 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M1 | 0.62 | 57.0 | 4.79e-01 | 100.0% | 80.0% |
| 3589965 | 2498.1.1.29 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78 | 0.52 | 43.0 | 4.51e-01 | 86.1% | 100.0% |