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STL6-S73_scaffold_1_prodigal-single.1__X__X__00019
Bact-VirSTL6-S73_scaffold_1_prodigal-single.1__X__X__00019
Identity
- Kingdom:
- phage
Quality
85.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-146
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2vqpA01 | 2.70.20.30 | Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › HRSV-S2 matrix protein, N-terminal domain | 0.61 | 42.0 | 4.58e-01 | 100.0% | 85.0% |
| 1u1sA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 24.0 | 3.40e-01 | 95.8% | 75.8% |
| 4g1lA01 | 2.70.20.50 | Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Viral matrix protein, N-terminal domain | 0.60 | 45.0 | 4.29e-01 | 100.0% | 68.1% |
| 7ylrA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.57 | 31.0 | 3.53e-01 | 97.9% | 68.6% |
| 4csbA00 | 2.40.128.480 | Mainly Beta › Beta Barrel › Lipocalin › Rhodococcus equi virulence-associated protein | 0.57 | 34.0 | 3.77e-01 | 97.9% | 73.5% |
| 2nykA01 | 3.30.500.30 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › | 0.53 | 33.0 | 3.27e-01 | 100.0% | 57.4% |
| 2ichA02 | 2.40.370.10 | Mainly Beta › Beta Barrel › AttH-like fold › AttH-like domain | 0.53 | 30.0 | 3.12e-01 | 83.3% | 58.5% |
| 3f1jA00 | 2.70.20.40 | Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Borna disease virus, matrix protein | 0.52 | 39.0 | 3.97e-01 | 100.0% | 79.3% |
| 4ifdI02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 31.0 | 3.19e-01 | 76.4% | 59.0% |
| 3bgyA00 | 3.20.100.10 | Alpha Beta › Alpha-Beta Barrel › mRNA Triphosphatase Cet1; Chain A › mRNA triphosphatase Cet1-like | 0.50 | 37.0 | 3.26e-01 | 99.3% | 49.6% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3588755 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 33.0 | 4.30e-01 | 99.3% | 97.3% |
| 863407 | 54.1.1.1 ↗ | beta barrels › EV matrix protein › EV matrix protein › EV matrix protein › Matrix | 0.59 | 44.0 | 4.34e-01 | 100.0% | 71.9% |
| 2097493 | 54.1.2.1 ↗ | beta barrels › EV matrix protein › EV matrix protein › Non-strctural protein 1 › Pneumo_NS1 | 0.59 | 39.0 | 4.06e-01 | 100.0% | 71.1% |
| 3711953 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.58 | 29.0 | 3.23e-01 | 98.6% | 59.1% |
| 2887044 | 54.1.1.6 ↗ | beta barrels › EV matrix protein › EV matrix protein › EV matrix protein › Matrix_Paramyxo_C | 0.56 | 40.0 | 3.89e-01 | 100.0% | 66.5% |
| 5029243 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.53 | 41.0 | 4.48e-01 | 100.0% | 97.5% |
| 1109145 | 54.1.1.4 ↗ | beta barrels › EV matrix protein › EV matrix protein › EV matrix protein › BDV_M | 0.53 | 38.0 | 3.91e-01 | 100.0% | 77.9% |
| 5070755 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.52 | 40.0 | 4.28e-01 | 100.0% | 97.5% |