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STL6-S73_scaffold_1_prodigal-single.1__X__X__00055
Bact-VirSTL6-S73_scaffold_1_prodigal-single.1__X__X__00055
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 93-231
Domain cluster:
rep: KU530220.1__AMD42788.1__SEA_XKCD426_47__00047__D98-202
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04203.19 best | Sortase | 65.7 | 4.90e-18 | 96.4% | 98.4% |
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4d70A00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.90 | 79.0 | 7.47e-01 | 100.0% | 78.8% |
| 5k9aA00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.88 | 80.0 | 6.69e-01 | 100.0% | 60.5% |
| 2w1jA00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.88 | 79.0 | 6.91e-01 | 100.0% | 66.7% |
| 2kw8A00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.87 | 76.0 | 7.20e-01 | 100.0% | 79.7% |
| 2w1kA00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.86 | 78.0 | 6.61e-01 | 100.0% | 62.5% |
| 3fn5B00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.86 | 78.0 | 7.31e-01 | 100.0% | 80.4% |
| 2ln7A00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.83 | 73.0 | 7.18e-01 | 100.0% | 87.1% |
| 5go5A00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.82 | 76.0 | 7.32e-01 | 100.0% | 87.5% |
| 1t2pA00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.80 | 74.0 | 7.29e-01 | 100.0% | 92.4% |
| 3psqB00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.76 | 72.0 | 6.49e-01 | 100.0% | 91.8% |
| 4ux7A00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.75 | 71.0 | 6.15e-01 | 100.0% | 82.4% |
| 4y4qA00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.74 | 70.0 | 6.44e-01 | 100.0% | 92.0% |
| 1ng5B00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.74 | 70.0 | 6.01e-01 | 100.0% | 80.6% |
| 5jcvA00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.73 | 69.0 | 6.32e-01 | 100.0% | 94.3% |
| 2q9kA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.63 | 41.0 | 4.05e-01 | 100.0% | 61.2% |
| 1y8qD03 | 3.10.290.20 | Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › Ubiquitin-like 2 activating enzyme e1b. Chain: B, domain 3 | 0.62 | 34.0 | 3.88e-01 | 81.3% | 70.5% |
| 3r5lA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.55 | 41.0 | 4.41e-01 | 100.0% | 93.1% |
| 2wzpP01 | 2.40.30.210 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.55 | 41.0 | 4.55e-01 | 99.3% | 100.0% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4586448 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.93 | 83.0 | 7.47e-01 | 100.0% | 71.3% |
| 1566317 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.90 | 79.0 | 7.47e-01 | 100.0% | 78.8% |
| 4135582 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.90 | 79.0 | 6.93e-01 | 100.0% | 66.3% |
| 2879064 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.89 | 79.0 | 7.83e-01 | 100.0% | 88.3% |
| 1842342 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.88 | 80.0 | 6.69e-01 | 100.0% | 60.5% |
| 154269 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.88 | 80.0 | 6.82e-01 | 100.0% | 64.0% |
| 5024134 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.88 | 75.0 | 7.54e-01 | 100.0% | 87.9% |
| 3587062 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.87 | 79.0 | 6.51e-01 | 100.0% | 57.8% |
| 2832652 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.87 | 79.0 | 6.91e-01 | 100.0% | 67.7% |
| 4344990 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.87 | 58.0 | 6.87e-01 | 75.5% | 94.0% |
| 2775426 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.87 | 78.0 | 6.78e-01 | 100.0% | 65.7% |
| 4187781 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.87 | 79.0 | 6.61e-01 | 100.0% | 60.9% |
| 169822 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.86 | 78.0 | 6.61e-01 | 100.0% | 62.5% |
| 3589952 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.85 | 80.0 | 7.09e-01 | 100.0% | 73.0% |
| 428579 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.84 | 72.0 | 7.26e-01 | 100.0% | 89.8% |
| 4033467 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.84 | 78.0 | 7.01e-01 | 100.0% | 74.4% |
| 4868829 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.83 | 71.0 | 7.56e-01 | 95.0% | 99.2% |
| 4102870 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.83 | 80.0 | 6.57e-01 | 100.0% | 62.3% |
| 3503399 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.83 | 78.0 | 7.74e-01 | 99.3% | 95.1% |
| 2034294 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.83 | 80.0 | 7.16e-01 | 100.0% | 79.4% |
| 153599 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.83 | 73.0 | 7.18e-01 | 100.0% | 87.1% |
| 2046344 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.83 | 80.0 | 6.76e-01 | 100.0% | 83.2% |
| 3587540 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.81 | 77.0 | 7.26e-01 | 100.0% | 85.3% |
| 2129791 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.78 | 74.0 | 6.26e-01 | 100.0% | 81.0% |
| 811 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.76 | 72.0 | 5.88e-01 | 100.0% | 72.8% |
| 1569000 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.74 | 70.0 | 6.44e-01 | 100.0% | 92.0% |
| 1824763 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.73 | 69.0 | 6.32e-01 | 100.0% | 94.3% |
| 1942280 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.70 | 67.0 | 6.01e-01 | 100.0% | 84.7% |
| 3942928 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.62 | 37.0 | 4.57e-01 | 100.0% | 96.5% |
| 5007090 | 11.1.1.33 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arch_flagellin | 0.58 | 42.0 | 4.11e-01 | 75.5% | 67.7% |
| 4934423 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.57 | 35.0 | 3.85e-01 | 94.2% | 76.4% |
| 5056879 | 11.1.1.33 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arch_flagellin | 0.56 | 40.0 | 3.99e-01 | 97.8% | 71.4% |
| 3187986 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.55 | 31.0 | 3.55e-01 | 95.7% | 73.3% |
| 4928053 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.54 | 34.0 | 3.60e-01 | 95.7% | 70.8% |
| 3350184 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.52 | 42.0 | 3.03e-01 | 85.6% | 30.1% |
| 3688023 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.52 | 45.0 | 2.84e-01 | 95.7% | 31.7% |