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STL6-S73_scaffold_1_prodigal-single.1__X__X__00089
Bact-VirSTL6-S73_scaffold_1_prodigal-single.1__X__X__00089
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-77
Domain cluster:
rep: OP172779.1__WAX12363.1__DO134P1_00025__00024__D2-85
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qgpA00 | 1.10.30.50 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › | 0.67 | 48.0 | 4.65e-01 | 73.7% | 69.9% |
| 3t7lA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.59 | 50.0 | 5.11e-01 | 92.1% | 95.9% |
| 2fwrA01 | 3.40.1170.30 | Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › | 0.52 | 30.0 | 3.33e-01 | 71.1% | 73.7% |
| 2xzmZ00 | 3.30.1230.20 | Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › Ribosomal protein S21 | 0.50 | 37.0 | 3.52e-01 | 80.3% | 80.4% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5032367 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.72 | 48.0 | 4.37e-01 | 73.7% | 52.0% |
| 3703254 | 376.1.3.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE | 0.72 | 55.0 | 5.47e-01 | 81.6% | 92.5% |
| 3705580 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.59 | 52.0 | 3.29e-01 | 98.7% | 59.8% |
| 3714795 | 376.1.3.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE | 0.58 | 42.0 | 4.03e-01 | 77.6% | 90.0% |
| 3861374 | 376.1.3.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE | 0.57 | 48.0 | 4.62e-01 | 90.8% | 87.1% |
| 5075145 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.56 | 30.0 | 3.29e-01 | 100.0% | 61.5% |
| 5061253 | 376.1.3.97 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › Prok-RING_2 | 0.55 | 46.0 | 4.53e-01 | 90.8% | 90.0% |
| 4066114 | 601.23.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III | 0.53 | 35.0 | 2.40e-01 | 100.0% | 18.5% |
| 3832280 | 377.1.1.86 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › C1_2 | 0.53 | 40.0 | 4.11e-01 | 100.0% | 87.1% |
| 3452412 | 601.23.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III | 0.52 | 34.0 | 2.32e-01 | 100.0% | 16.2% |
| 4220833 | 601.23.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III | 0.50 | 35.0 | 2.45e-01 | 72.4% | 92.1% |
| 4185652 | 601.23.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III | 0.50 | 35.0 | 2.45e-01 | 73.7% | 90.4% |